RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 LCATP04180 440 aa12.69□□□□□ -0.38
TNF-208ENST00000449264 CD36P16671 472 aa12.69□□□□□ -0.38
TNF-208ENST00000449264 TGFBR2P37173 567 aa12.69□□□□□ -0.38
TNF-208ENST00000449264 RPS25P62851 125 aaKnown RBP12.69□□□□□ -0.38
TNF-208ENST00000449264 TFF3Q07654 80 aa12.69□□□□□ -0.38
TNF-208ENST00000449264 TPBGQ13641 420 aa12.69□□□□□ -0.38
TNF-208ENST00000449264 KRTAP27-1Q3LI81 207 aa12.69□□□□□ -0.38
TNF-208ENST00000449264 ZNF676Q8N7Q3 588 aa12.69□□□□□ -0.38
TNF-208ENST00000449264 IL17RDQ8NFM7 739 aa12.69□□□□□ -0.38
TNF-208ENST00000449264 OR8B12Q8NGG6 310 aa12.69□□□□□ -0.38
TNF-208ENST00000449264 OR10A4Q9H209 315 aa12.69□□□□□ -0.38
TNF-208ENST00000449264 CDH20Q9HBT6 801 aa12.69□□□□□ -0.38
TNF-208ENST00000449264 NDUFB11Q9NX14 153 aa12.69□□□□□ -0.38
TNF-208ENST00000449264 OGG1O15527 345 aa12.68□□□□□ -0.38
TNF-208ENST00000449264 PLPP2O43688 288 aa12.68□□□□□ -0.38
TNF-208ENST00000449264 ZFPL1O95159 310 aa12.68□□□□□ -0.38
TNF-208ENST00000449264 IGLV1-44P01699 117 aa12.68□□□□□ -0.38
TNF-208ENST00000449264 PPP3CBP16298 524 aa12.68□□□□□ -0.38
TNF-208ENST00000449264 SNAI3Q3KNW1 292 aa12.68□□□□□ -0.38
TNF-208ENST00000449264 FDX2Q6P4F2 183 aa12.68□□□□□ -0.38
TNF-208ENST00000449264 COMMD2Q86X83 199 aa12.68□□□□□ -0.38
TNF-208ENST00000449264 OR5AK2Q8NH90 309 aa12.68□□□□□ -0.38
TNF-208ENST00000449264 GHSRQ92847 366 aa12.68□□□□□ -0.38
TNF-208ENST00000449264 PGLYRP3Q96LB9 341 aa12.68□□□□□ -0.38
TNF-208ENST00000449264 WFIKKN1Q96NZ8 548 aa12.68□□□□□ -0.38
TNF-208ENST00000449264 COMMD4Q9H0A8 199 aa12.68□□□□□ -0.38
TNF-208ENST00000449264 SLC24A3Q9HC58 644 aa12.68□□□□□ -0.38
TNF-208ENST00000449264 MOV10Q9HCE1 1003 aaKnown RBP12.68□□□□□ -0.38
TNF-208ENST00000449264 CRNNQ9UBG3 495 aaPredicted RBP12.68□□□□□ -0.38
TNF-208ENST00000449264 NUFIP1Q9UHK0 495 aaKnown RBP12.68□□□□□ -0.38
TNF-208ENST00000449264 LRRK2Q5S007 2527 aa12.68□□□□□ -0.38
TNF-208ENST00000449264 C5orf63A6NC05 138 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 TMEM212A6NML5 194 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 OR4C45A6NMZ5 311 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 THBDP07204 575 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 SORDQ00796 357 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 GPR107Q5VW38 600 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 SEZ6L2Q6UXD5 910 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 PRSS45Q7RTY3 260 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 CLVS1Q8IUQ0 354 aaPredicted RBP12.67□□□□□ -0.38
TNF-208ENST00000449264 RDH10Q8IZV5 341 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 OR13C5Q8NGS8 318 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 LINC01560Q8TB33 94 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 RPS4Y2Q8TD47 263 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 YIPF6Q96EC8 236 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 FUNDC2Q9BWH2 189 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 ZNF319Q9P2F9 582 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 DPPA5A6NC42 116 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 P2RY10O00398 339 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 TTRP02766 147 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 RNF224P0DH78 156 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 NR4A1P22736 598 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 GADD45AP24522 165 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 GABRA5P31644 462 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 WNT5AP41221 380 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 CCR9P51686 369 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 ELMOD2Q8IZ81 293 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 ZNF101Q8IZC7 436 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 FAM169BQ8N8A8 192 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 OR1J2Q8NGS2 313 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 OR2AE1Q8NHA4 323 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 ABHD4Q8TB40 342 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 DCLRE1CQ96SD1 692 aaKnown RBP12.67□□□□□ -0.38
TNF-208ENST00000449264 OR10A2Q9H208 303 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 NPDC1Q9NQX5 325 aaPredicted RBP12.67□□□□□ -0.38
TNF-208ENST00000449264 NDRG3Q9UGV2 375 aa12.67□□□□□ -0.38
TNF-208ENST00000449264 LOC100506127A0A0U1RQW1 187 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 LOC107986453A0A1B0GWG9 222 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 CCDC160A6NGH7 325 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 TUBAL3A6NHL2 446 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 FAM157BP0CG42 384 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 UBCP0CG48 685 aaKnown RBP12.66□□□□□ -0.38
TNF-208ENST00000449264 PAX7P23759 505 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 TTKP33981 857 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 GPR50Q13585 617 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 INSL4Q14641 139 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 RFPL4BQ6ZWI9 263 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 OR52H1Q8NGJ2 320 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 OR10AC1Q8NH08 325 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 OR51E1Q8TCB6 317 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 RGP1Q92546 391 aaPredicted RBP12.66□□□□□ -0.38
TNF-208ENST00000449264 KCNS3Q9BQ31 491 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 C1QTNF5Q9BXJ0 243 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 NAA50Q9GZZ1 169 aaKnown RBP12.66□□□□□ -0.38
TNF-208ENST00000449264 OR51E2Q9H255 320 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 SP140LQ9H930 580 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 EXOSC4Q9NPD3 245 aaKnown RBP12.66□□□□□ -0.38
TNF-208ENST00000449264 ZNF281Q9Y2X9 895 aa12.66□□□□□ -0.38
TNF-208ENST00000449264 SF3B6Q9Y3B4 125 aaKnown RBP12.66□□□□□ -0.38
TNF-208ENST00000449264 SPTAN1Q13813 2472 aaKnown RBP12.66□□□□□ -0.38
TNF-208ENST00000449264 PLCE1Q9P212 2302 aa12.65□□□□□ -0.38
TNF-208ENST00000449264 IGHV2OR16-5A0A0B4J2B6 119 aa12.65□□□□□ -0.38
TNF-208ENST00000449264 GPRIN2O60269 458 aa12.65□□□□□ -0.38
TNF-208ENST00000449264 NGFP01138 241 aa12.65□□□□□ -0.38
TNF-208ENST00000449264 PLA2G2AP14555 144 aa12.65□□□□□ -0.38
TNF-208ENST00000449264 PSMA1P25786 263 aaKnown RBP12.65□□□□□ -0.38
TNF-208ENST00000449264 CALCRP30988 508 aa12.65□□□□□ -0.38
TNF-208ENST00000449264 NAAAQ02083 359 aa12.65□□□□□ -0.38
TNF-208ENST00000449264 SPOCK1Q08629 439 aa12.65□□□□□ -0.38
TNF-208ENST00000449264 GLYATL3Q5SZD4 288 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms