RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 C5orf63A6NC05 138 aa13.06□□□□□ -0.32
CCNE1-203ENST00000444983 M0R1B8 84 aa13.06□□□□□ -0.32
CCNE1-203ENST00000444983 PLPP2O43688 288 aa13.06□□□□□ -0.32
CCNE1-203ENST00000444983 PTAFRP25105 342 aa13.06□□□□□ -0.32
CCNE1-203ENST00000444983 PCSK6P29122 969 aa13.06□□□□□ -0.32
CCNE1-203ENST00000444983 GBX2P52951 348 aaPredicted RBP13.06□□□□□ -0.32
CCNE1-203ENST00000444983 GP2P55259 537 aaKnown RBP13.06□□□□□ -0.32
CCNE1-203ENST00000444983 TPBGQ13641 420 aa13.06□□□□□ -0.32
CCNE1-203ENST00000444983 CDK5R1Q15078 307 aa13.06□□□□□ -0.32
CCNE1-203ENST00000444983 NEDD8Q15843 81 aa13.06□□□□□ -0.32
CCNE1-203ENST00000444983 WDR38Q5JTN6 314 aa13.06□□□□□ -0.32
CCNE1-203ENST00000444983 ZNF283Q8N7M2 679 aa13.06□□□□□ -0.32
CCNE1-203ENST00000444983 PPP1R14AQ96A00 147 aa13.06□□□□□ -0.32
CCNE1-203ENST00000444983 C4orf45Q96LM5 186 aa13.06□□□□□ -0.32
CCNE1-203ENST00000444983 NGBQ9NPG2 151 aa13.06□□□□□ -0.32
CCNE1-203ENST00000444983 TBCCD1Q9NVR7 557 aa13.06□□□□□ -0.32
CCNE1-203ENST00000444983 CRIM1Q9NZV1 1036 aa13.06□□□□□ -0.32
CCNE1-203ENST00000444983 OR4C45A6NMZ5 311 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 J3QW42 95 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 SIAH2O43255 324 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 NGFP01138 241 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 IGLV3-1P01715 115 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 CD1AP06126 327 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 SLC2A1P11166 492 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 KIR3DL2P43630 455 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 ALDH3B2P48448 385 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 TAS2R43P59537 309 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 GPR50Q13585 617 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 ALKBH1Q13686 389 aaKnown RBP13.05□□□□□ -0.32
CCNE1-203ENST00000444983 SNAI3Q3KNW1 292 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 NCMAPQ5T1S8 102 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 TMEM108Q6UXF1 575 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 ELMOD2Q8IZ81 293 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 SMIM19Q96E16 107 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 PGLYRP3Q96LB9 341 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 PBOV1Q9GZY1 135 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 MOB1AQ9H8S9 216 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 OR52A1Q9UKL2 312 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 LOC110117498-PIK3R3F6TDL0 507 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 ZFPL1O95159 310 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 TTRP02766 147 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 CPEP16870 476 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 CCNOP22674 350 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 LOXP28300 417 aaPredicted RBP13.05□□□□□ -0.32
CCNE1-203ENST00000444983 SLC6A9P48067 706 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 NR1H2P55055 460 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 BSPH1Q075Z2 132 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 TIGD6Q17RP2 521 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 ARMCX4Q5H9R4 360 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 ALKBH2Q6NS38 261 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 ZFP41Q8N8Y5 198 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 OR8B12Q8NGG6 310 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 OR52H1Q8NGJ2 320 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 APOBEC3DQ96AK3 386 aaPredicted RBP13.05□□□□□ -0.32
CCNE1-203ENST00000444983 SCOCQ9UIL1 159 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 SLC22A13Q9Y226 551 aa13.05□□□□□ -0.32
CCNE1-203ENST00000444983 DEFB108AA8MXU0 73 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 SMPD2O60906 423 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 CLDN1O95832 211 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 CRYAAP02489 173 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 ISG15P05161 165 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 HSMCR30P0CW71 290 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 CELP19835 753 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 NR4A1P22736 598 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 LIPAP38571 399 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 KIR2DL3P43628 341 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 RGS6P49758 472 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 UCP2P55851 309 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 SSX1Q16384 188 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 FAM57BQ71RH2 274 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 PHC2Q8IXK0 858 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 CDH20Q9HBT6 801 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 VCX3AQ9NNX9 186 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 BRD7Q9NPI1 651 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 SF3B6Q9Y3B4 125 aaKnown RBP13.04□□□□□ -0.32
CCNE1-203ENST00000444983 PLCE1Q9P212 2302 aa13.04□□□□□ -0.32
CCNE1-203ENST00000444983 TRBV2A0A0J9YWF9 115 aa13.03□□□□□ -0.32
CCNE1-203ENST00000444983 A0A0U1RQV5 110 aa13.03□□□□□ -0.32
CCNE1-203ENST00000444983 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.03□□□□□ -0.32
CCNE1-203ENST00000444983 LCATP04180 440 aa13.03□□□□□ -0.32
CCNE1-203ENST00000444983 ANXA2P07355 339 aaKnown RBP13.03□□□□□ -0.32
CCNE1-203ENST00000444983 NKX6-1P78426 367 aaPredicted RBP13.03□□□□□ -0.32
CCNE1-203ENST00000444983 SPOCK1Q08629 439 aa13.03□□□□□ -0.32
CCNE1-203ENST00000444983 Q6ZSR3 168 aa13.03□□□□□ -0.32
CCNE1-203ENST00000444983 RFPL4BQ6ZWI9 263 aa13.03□□□□□ -0.32
CCNE1-203ENST00000444983 FAM222BQ8WU58 562 aa13.03□□□□□ -0.32
CCNE1-203ENST00000444983 GHSRQ92847 366 aa13.03□□□□□ -0.32
CCNE1-203ENST00000444983 SPSB4Q96A44 273 aa13.03□□□□□ -0.32
CCNE1-203ENST00000444983 SGK3Q96BR1 496 aa13.03□□□□□ -0.32
CCNE1-203ENST00000444983 SPOCK3Q9BQ16 436 aa13.03□□□□□ -0.32
CCNE1-203ENST00000444983 PDCD1LG2Q9BQ51 273 aa13.03□□□□□ -0.32
CCNE1-203ENST00000444983 ESRP2Q9H6T0 727 aaKnown RBP13.03□□□□□ -0.32
CCNE1-203ENST00000444983 SP140LQ9H930 580 aa13.03□□□□□ -0.32
CCNE1-203ENST00000444983 STARD10Q9Y365 291 aa13.03□□□□□ -0.32
CCNE1-203ENST00000444983 A0A1B0GTI1 187 aa13.02□□□□□ -0.32
CCNE1-203ENST00000444983 TMEM212A6NML5 194 aa13.02□□□□□ -0.32
CCNE1-203ENST00000444983 ABCD4O14678 606 aa13.02□□□□□ -0.32
CCNE1-203ENST00000444983 PSMB9P28065 219 aa13.02□□□□□ -0.32
CCNE1-203ENST00000444983 RPS11P62280 158 aaKnown RBP eCLIP13.02□□□□□ -0.32
CCNE1-203ENST00000444983 BEX5Q5H9J7 111 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms