RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SLC9A3P48764 834 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 CDONQ4KMG0 1287 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 SFRP4Q6FHJ7 346 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-208ENST00000443046 BTN2A1Q7KYR7 527 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 NRMQ8IXM6 262 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 PDZD9Q8IXQ8 264 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 MICU2Q8IYU8 434 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 PLPP7Q8NBV4 271 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 LY6G5BQ8NDX9 201 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 MRAPQ8TCY5 172 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 TSPEARQ8WU66 669 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 TLCD1Q96CP7 247 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 HCAR1Q9BXC0 346 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 PARD6BQ9BYG5 372 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 SEMA6AQ9H2E6 1030 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 CNTD2Q9H8S5 307 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 VSX1Q9NZR4 365 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-208ENST00000443046 KAAG1Q9UBP8 84 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 COA3Q9Y2R0 106 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-208ENST00000443046 FAM96BQ9Y3D0 163 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 LHFPL6Q9Y693 200 aa11.83□□□□□ -0.52
HMGN1-208ENST00000443046 A0A1B0GVI7 797 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 ELOVL7A1L3X0 281 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 EFCAB9A8MZ26 197 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 RNASEK-C17orf49H0YIS7 233 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 XKRYO14609 159 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 CDC42EP2O14613 210 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 SLC16A7O60669 478 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 KHDRBS3O75525 346 aaKnown RBP11.82□□□□□ -0.52
HMGN1-208ENST00000443046 EFNB2P52799 333 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 PRSS12P56730 875 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 MAGOHP61326 146 aaKnown RBP11.82□□□□□ -0.52
HMGN1-208ENST00000443046 BEND6Q5SZJ8 279 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-208ENST00000443046 NANOGP8Q6NSW7 305 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 Q6ZTK2 550 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 VMO1Q7Z5L0 202 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 GJC3Q8NFK1 279 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 OR13C2Q8NGS9 318 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 PRRC1Q96M27 445 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 DMRTB1Q96MA1 342 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 HDHD2Q9H0R4 259 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 NMNAT1Q9HAN9 279 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-208ENST00000443046 TRIM36Q9NQ86 728 aa11.82□□□□□ -0.52
HMGN1-208ENST00000443046 RPUSD1Q9UJJ7 312 aaKnown RBP11.82□□□□□ -0.52
HMGN1-208ENST00000443046 TRAV38-1A0A0B4J264 116 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 OOEPA6NGQ2 149 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 DVL1O14640 695 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 IMPA2O14732 288 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 ANGPT2O15123 496 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 LHBP01229 141 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 ACSM4P0C7M7 580 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 NFYCQ13952 458 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 VAX1Q5SQQ9 334 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 TMPRSS11FQ6ZWK6 438 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 FAM90A1Q86YD7 464 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 RNF113BQ8IZP6 322 aaKnown RBP11.81□□□□□ -0.52
HMGN1-208ENST00000443046 OR5R1Q8NH85 324 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 PPP1R35Q8TAP8 253 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 STON2Q8WXE9 905 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 ZNF583Q96ND8 569 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 ZNF570Q96NI8 536 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 SYT4Q9H2B2 425 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 FN3KRPQ9HA64 309 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 NECAP2Q9NVZ3 263 aa11.81□□□□□ -0.52
HMGN1-208ENST00000443046 CAB39Q9Y376 341 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-208ENST00000443046 BTBD17A6NE02 478 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 FFAR1O14842 300 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 GMDSO60547 372 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 GYPAP02724 150 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 GABRA5P31644 462 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 RPL4P36578 427 aaKnown RBP11.8□□□□□ -0.52
HMGN1-208ENST00000443046 KIR2DS4P43632 304 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 OR8B8Q15620 311 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 ZBED5Q49AG3 693 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 CYBRD1Q53TN4 286 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 OXLD1Q5BKU9 147 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 TEX36Q5VZQ5 186 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 C11orf88Q6PI97 169 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 OFCC1Q8IZS5 231 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 GCSAMQ8N6F7 178 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 SLCO4A1Q96BD0 722 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 SLC22A4Q9H015 551 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 NUAK2Q9H093 628 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 NRIP3Q9NQ35 241 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.8□□□□□ -0.52
HMGN1-208ENST00000443046 AURKAIP1Q9NWT8 199 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-208ENST00000443046 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.8□□□□□ -0.52
HMGN1-208ENST00000443046 RAB21Q9UL25 225 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 SIGLEC9Q9Y336 463 aa11.8□□□□□ -0.52
HMGN1-208ENST00000443046 V9GYY5 206 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-208ENST00000443046 A0A087WUU8 490 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 FXYD1O00168 92 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 PTP4A3O75365 173 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 PPP1R3DO95685 299 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 IFNA14P01570 189 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 CA6P23280 308 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 SDHAP31040 664 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 DBPQ10586 325 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-208ENST00000443046 KRR1Q13601 381 aaKnown RBP11.79□□□□□ -0.52
HMGN1-208ENST00000443046 TRAM2Q15035 370 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms