RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 HSD17B1P14061 328 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 PRTN3P24158 256 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 PITPNBP48739 271 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.88□□□□□ -0.83
TTC28-203ENST00000442232 TRAP1Q12931 704 aaKnown RBP9.88□□□□□ -0.83
TTC28-203ENST00000442232 OR8G1Q15617 311 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 KCNJ8Q15842 424 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 ZNF181Q2M3W8 571 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 AWAT1Q58HT5 328 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 C16orf89Q6UX73 402 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 CFAP77Q6ZQR2 320 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 PGAP1Q75T13 922 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 ZDHHC21Q8IVQ6 265 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 PGAM4Q8N0Y7 254 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 PARP8Q8N3A8 854 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 ERGIC1Q969X5 290 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 FUZQ9BT04 418 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 SLC22A4Q9H015 551 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 FN3KQ9H479 309 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 KIF17Q9P2E2 1029 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 CLN8Q9UBY8 286 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 ZNF69Q9UC07 566 aa9.88□□□□□ -0.83
TTC28-203ENST00000442232 GGT3PA6NGU5 568 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 M0R135 149 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 MLNRO43193 412 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 WNT2P09544 360 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 PPIAL4GP0DN37 164 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 HKR1P10072 659 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 GGT2P36268 569 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 RBMXP38159 391 aaKnown RBP9.87□□□□□ -0.83
TTC28-203ENST00000442232 GSSP48637 474 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 TSPAN31Q12999 210 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 GK2Q14410 553 aaPredicted RBP9.87□□□□□ -0.83
TTC28-203ENST00000442232 TAF13Q15543 124 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 ZNF404Q494X3 552 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 CLEC12AQ5QGZ9 265 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 SLC35F1Q5T1Q4 408 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 ZNF620Q6ZNG0 422 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 COLCA1Q6ZS62 124 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 ZBTB46Q86UZ6 589 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 LINC00471Q8N535 108 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 CELF2-AS1Q8N7Q2 184 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 OR2T4Q8NH00 348 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 RAB40AQ8WXH6 277 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 SLCO4A1Q96BD0 722 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 ZNF799Q96GE5 643 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 TMEM246Q9BRR3 403 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 MMADHCQ9H3L0 296 aaPredicted RBP9.87□□□□□ -0.83
TTC28-203ENST00000442232 FN3KRPQ9HA64 309 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 TMEM165Q9HC07 324 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 TRIM36Q9NQ86 728 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 TBC1D23Q9NUY8 699 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 CYB5R1Q9UHQ9 305 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 TAGLN3Q9UI15 199 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 CDH10Q9Y6N8 788 aa9.87□□□□□ -0.83
TTC28-203ENST00000442232 TRAV40A0A0B4J280 105 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.86□□□□□ -0.83
TTC28-203ENST00000442232 OR6C68A6NDL8 312 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 PHYHO14832 338 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 SNX3O60493 162 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 KRT36O76013 467 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 FSTL3O95633 263 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 SEMG1P04279 462 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 HLA-DPB1P04440 258 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 CD200P41217 278 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 GATA4P43694 442 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 PAX8Q06710 450 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 MZT1Q08AG7 82 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 SPATS1Q496A3 300 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 KLF17Q5JT82 389 aaPredicted RBP9.86□□□□□ -0.83
TTC28-203ENST00000442232 PGBD2Q6P3X8 592 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 SHISA2Q6UWI4 295 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 DCDC5Q6ZRR9 648 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 TECTBQ96PL2 329 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 DUX5Q96PT3 197 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 CDRT15Q96T59 188 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 NUDT16L1Q9BRJ7 211 aaKnown RBP9.86□□□□□ -0.83
TTC28-203ENST00000442232 COPS4Q9BT78 406 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 ADAT1Q9BUB4 502 aaKnown RBP9.86□□□□□ -0.83
TTC28-203ENST00000442232 IL1RAPQ9NPH3 570 aa9.86□□□□□ -0.83
TTC28-203ENST00000442232 IGHV3OR16-10A0A075B7F0 116 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 TNFRSF11BO00300 401 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 ATP8B1O43520 1251 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 ENSAO43768 121 aaKnown RBP9.85□□□□□ -0.83
TTC28-203ENST00000442232 GMDSO60547 372 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 FAM20BO75063 409 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 DCTN3O75935 186 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 CCNB2O95067 398 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 RNASE1P07998 156 aaKnown RBP9.85□□□□□ -0.83
TTC28-203ENST00000442232 CA6P23280 308 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 PYCR1P32322 319 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 CD80P33681 288 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 MSX2P35548 267 aaPredicted RBP9.85□□□□□ -0.83
TTC28-203ENST00000442232 NPY4RP50391 375 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 MNAT1P51948 309 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 PRSS12P56730 875 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 KRTAP27-1Q3LI81 207 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 PRAMEF6Q5VXH4 476 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 DEFB107AQ8IZN7 70 aa9.85□□□□□ -0.83
TTC28-203ENST00000442232 BCL6BQ8N143 479 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms