RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 GK2Q14410 553 aaPredicted RBP11.63□□□□□ -0.55
LTBR-202ENST00000440421 CR1LQ2VPA4 569 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 SNAI3Q3KNW1 292 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 ERI1Q8IV48 349 aaKnown RBP11.63□□□□□ -0.55
LTBR-202ENST00000440421 OR8G5Q8NG78 346 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 OR10AD1Q8NGE0 317 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 OR6N2Q8NGY6 317 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 ITLN1Q8WWA0 313 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 UTP4Q969X6 686 aaKnown RBP11.63□□□□□ -0.55
LTBR-202ENST00000440421 C1orf159Q96HA4 380 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 OR2V2Q96R30 315 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 INTS14Q96SY0 518 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 MMADHCQ9H3L0 296 aaPredicted RBP11.63□□□□□ -0.55
LTBR-202ENST00000440421 DDX28Q9NUL7 540 aaKnown RBP11.63□□□□□ -0.55
LTBR-202ENST00000440421 LPAR3Q9UBY5 353 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 N6AMT1Q9Y5N5 214 aa11.63□□□□□ -0.55
LTBR-202ENST00000440421 ANK3Q12955 4377 aaKnown RBP11.63□□□□□ -0.55
LTBR-202ENST00000440421 JMJD1CQ15652 2540 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 TANC2Q9HCD6 1990 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 IGHV3-64DA0A0J9YX35 117 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 C5orf63A6NC05 138 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 IQCF6A8MYZ5 107 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 B4DSR2 109 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 H0YL77 283 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 SURF4O15260 269 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 GLCEO94923 617 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 HMGN1P05114 100 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 FAM157CP0CG43 387 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 SLC2A1P11166 492 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 TNFRSF1AP19438 455 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 ANOS1P23352 680 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 SLC3A1Q07837 685 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 ATP6AP1Q15904 470 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 PCK2Q16822 640 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 KLHL12Q53G59 568 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 TEX30Q5JUR7 227 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 MRPL21Q7Z2W9 205 aaKnown RBP11.62□□□□□ -0.55
LTBR-202ENST00000440421 DPY19L4Q7Z388 723 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 GLCCI1Q86VQ1 547 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 OR13G1Q8NGZ3 307 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 OR5K1Q8NHB7 308 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 ST7LQ8TDW4 575 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 ZMYND19Q96E35 227 aaPredicted RBP11.62□□□□□ -0.55
LTBR-202ENST00000440421 NRBF2Q96F24 287 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 PLEKHA8Q96JA3 519 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 ZNF665Q9H7R5 613 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 PAPOLBQ9NRJ5 636 aaKnown RBP11.62□□□□□ -0.55
LTBR-202ENST00000440421 TMEM106BQ9NUM4 274 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 IL19Q9UHD0 177 aa11.62□□□□□ -0.55
LTBR-202ENST00000440421 TMEFF2Q9UIK5 374 aaPredicted RBP11.62□□□□□ -0.55
LTBR-202ENST00000440421 ZNF878C9JN71 531 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 SELENOFO60613 162 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 CIB2O75838 187 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 IFNA2P01563 188 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 HLA-DPB1P04440 258 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 MSMBP08118 114 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 SELEP16581 610 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 HNF1AP20823 631 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 OTX1P32242 354 aaPredicted RBP11.61□□□□□ -0.55
LTBR-202ENST00000440421 DAPP51397 102 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 DVL1P1P54792 670 aaPredicted RBP11.61□□□□□ -0.55
LTBR-202ENST00000440421 FAHD1Q6P587 224 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 DRAM2Q6UX65 266 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 PGAP1Q75T13 922 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 AMIGO2Q86SJ2 522 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 PEG10Q86TG7 708 aaKnown RBP11.61□□□□□ -0.55
LTBR-202ENST00000440421 CPOQ8IVL8 374 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 ZNF283Q8N7M2 679 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 BBS1Q8NFJ9 593 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 OR2AE1Q8NHA4 323 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 SPRYD4Q8WW59 207 aaPredicted RBP11.61□□□□□ -0.55
LTBR-202ENST00000440421 KCNJ15Q99712 375 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 GAL3ST1Q99999 423 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 SLC30A2Q9BRI3 323 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 ABHD6Q9BV23 337 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 TEX12Q9BXU0 123 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 SLC25A19Q9HC21 320 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 TMEM100Q9NV29 134 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 UBAP1Q9NZ09 502 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 PPP1R3CQ9UQK1 317 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 AP4S1Q9Y587 144 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.61□□□□□ -0.559e-7■■■■□ 20.7
LTBR-202ENST00000440421 DYSFO75923 2080 aa11.61□□□□□ -0.55
LTBR-202ENST00000440421 F5H5P2 479 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 G3V2T6 193 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 MLNRO43193 412 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 MITFO75030 526 aaPredicted RBP11.6□□□□□ -0.55
LTBR-202ENST00000440421 IGHV2-5P01817 119 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 SBK2P0C263 348 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 SRD5A1P18405 259 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 FASP25445 335 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 CX3CR1P49238 355 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 CRISP1P54107 249 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 RPS7P62081 194 aaKnown RBP11.6□□□□□ -0.55
LTBR-202ENST00000440421 ZNF92Q03936 586 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 GLYATL3Q5SZD4 288 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 CXXC5Q7LFL8 322 aaKnown RBP11.6□□□□□ -0.55
LTBR-202ENST00000440421 TIGD4Q8IY51 512 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 OR51F2Q8NH61 342 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 DNAJC9Q8WXX5 260 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms