RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 BCL2L14Q9BZR8 327 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 ST6GALNAC2Q9UJ37 374 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 OR52A1Q9UKL2 312 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 TMEM212A6NML5 194 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 XRCC2O43543 280 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 PLPP2O43688 288 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 GPRIN2O60269 458 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 RPP14O95059 124 aaKnown RBP10.97□□□□□ -0.65
SCLT1-202ENST00000439369 PNPP00491 289 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 LCATP04180 440 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 ISG15P05161 165 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 LCKP06239 509 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 UBCP0CG48 685 aaKnown RBP10.97□□□□□ -0.65
SCLT1-202ENST00000439369 RNF224P0DH78 156 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 ATP6V1B1P15313 513 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 SLC6A9P48067 706 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 RPS23P62266 143 aaKnown RBP10.97□□□□□ -0.65
SCLT1-202ENST00000439369 DAZAP2Q15038 168 aaPredicted RBP10.97□□□□□ -0.65
SCLT1-202ENST00000439369 CDK5R1Q15078 307 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 TIGD6Q17RP2 521 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 DMKNQ6E0U4 476 aaPredicted RBP10.97□□□□□ -0.65
SCLT1-202ENST00000439369 MYPOPQ86VE0 399 aaPredicted RBP10.97□□□□□ -0.65
SCLT1-202ENST00000439369 LINC01560Q8TB33 94 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 SLC7A6Q92536 515 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 SMIM19Q96E16 107 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 ZC3HAV1LQ96H79 300 aaKnown RBP10.97□□□□□ -0.65
SCLT1-202ENST00000439369 C1QTNF6Q9BXI9 259 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 PBOV1Q9GZY1 135 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 OR10A2Q9H208 303 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 G6PC2Q9NQR9 355 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 KCNN3Q9UGI6 736 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 GRIP1Q9Y3R0 1128 aa10.97□□□□□ -0.65
SCLT1-202ENST00000439369 TRBV2A0A0J9YWF9 115 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 DPRXA6NFQ7 191 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 OR4C45A6NMZ5 311 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 PRSS44E7EML9 344 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 E9PI62 339 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 LALBAP00709 142 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 ANXA2P07355 339 aaKnown RBP10.96□□□□□ -0.65
SCLT1-202ENST00000439369 CPEP16870 476 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 CCNOP22674 350 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 NR4A1P22736 598 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 PSMA1P25786 263 aaKnown RBP10.96□□□□□ -0.65
SCLT1-202ENST00000439369 PSMB10P40306 273 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 WNT5AP41221 380 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 UCP2P55851 309 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 HGFACQ04756 655 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 BSPH1Q075Z2 132 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 MFGE8Q08431 387 aaPredicted RBP10.96□□□□□ -0.65
SCLT1-202ENST00000439369 MALLQ13021 153 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 TRAM1Q15629 374 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 NEDD8Q15843 81 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 WDR38Q5JTN6 314 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 TMEM244Q5VVB8 128 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 MEX3BQ6ZN04 569 aaKnown RBP10.96□□□□□ -0.65
SCLT1-202ENST00000439369 FAM57BQ71RH2 274 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 PRSS35Q8N3Z0 413 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 PAQR4Q8N4S7 273 aaPredicted RBP10.96□□□□□ -0.65
SCLT1-202ENST00000439369 NUP37Q8NFH4 326 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 AKAP1Q92667 903 aaKnown RBP eCLIP10.96□□□□□ -0.65
SCLT1-202ENST00000439369 THRSPQ92748 146 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 UFD1Q92890 307 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 SPSB4Q96A44 273 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 PGAM5Q96HS1 289 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 OPALINQ96PE5 141 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 COMMD4Q9H0A8 199 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 CRIM1Q9NZV1 1036 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 FRRS1LQ9P0K9 344 aa10.96□□□□□ -0.65
SCLT1-202ENST00000439369 DOPEY1Q5JWR5 2465 aa10.96□□□□□ -0.66
SCLT1-202ENST00000439369 CACNA1CQ13936 2221 aa10.96□□□□□ -0.66
SCLT1-202ENST00000439369 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.95□□□□□ -0.66
SCLT1-202ENST00000439369 LOC390937A0A1W2PQ73 354 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 DHRS7CA6NNS2 312 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 DEFB108AA8MXU0 73 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 C19orf84I3L1E1 186 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 SMPD2O60906 423 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 IGLV3-1P01715 115 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 TTRP02766 147 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 TFAP2AP05549 437 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 CD3EP07766 207 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 CCL2P13500 99 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 ZNF12P17014 697 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 CELP19835 753 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 CCL1P22362 96 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 PSMB9P28065 219 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 CALCRP30988 508 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 TTKP33981 857 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 KIR3DL2P43630 455 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 RPL5P46777 297 aaKnown RBP10.95□□□□□ -0.66
SCLT1-202ENST00000439369 ALDH3B2P48448 385 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 NANOS3P60323 173 aaKnown RBP10.95□□□□□ -0.66
SCLT1-202ENST00000439369 NKX6-1P78426 367 aaPredicted RBP10.95□□□□□ -0.66
SCLT1-202ENST00000439369 ARMCX4Q5H9R4 360 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 ALKBH2Q6NS38 261 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 Q6ZSR3 168 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 MS4A15Q8N5U1 240 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 OR8B12Q8NGG6 310 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 OR5AK2Q8NH90 309 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 PLPPR2Q96GM1 343 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 TMEM204Q9BSN7 226 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms