RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 TMEM92Q6UXU6 159 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 MED25Q71SY5 747 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 HOXB13Q92826 284 aaPredicted RBP12.11□□□□□ -0.47
PCNX3-202ENST00000439247 CNTD2Q9H8S5 307 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 SLC2A4RGQ9NR83 387 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 SLC17A5Q9NRA2 495 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 C5orf52A6NGY3 159 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 LDLRAD4O15165 306 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 MED6O75586 246 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 OR6A2O95222 327 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 HOXB2P14652 356 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 HLA-GP17693 338 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 RAB5BP61020 215 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 UNC119Q13432 240 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 RPL7L1Q6DKI1 246 aaKnown RBP12.11□□□□□ -0.47
PCNX3-202ENST00000439247 DHRS11Q6UWP2 260 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 LINC00346Q8IVM7 164 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 SECTM1Q8WVN6 248 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 HIST1H2BAQ96A08 127 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 NICN1Q9BSH3 213 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 ABHD6Q9BV23 337 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 PTGES2Q9H7Z7 377 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 RPS10P5Q9NQ39 176 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 A6NLC8 198 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 METTL12A8MUP2 240 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 EIF1AYO14602 144 aaKnown RBP12.11□□□□□ -0.47
PCNX3-202ENST00000439247 EIF1BO60739 113 aaKnown RBP12.11□□□□□ -0.47
PCNX3-202ENST00000439247 S100A6P06703 90 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 IGFBP3P17936 291 aaPredicted RBP12.11□□□□□ -0.47
PCNX3-202ENST00000439247 PTAFRP25105 342 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 EIF1P41567 113 aaKnown RBP12.11□□□□□ -0.47
PCNX3-202ENST00000439247 RPS21P63220 83 aaKnown RBP12.11□□□□□ -0.47
PCNX3-202ENST00000439247 WBP2NLQ6ICG8 309 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 PPP1R3BQ86XI6 285 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 AQP3Q92482 292 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 OR10C1Q96KK4 312 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 IP6K3Q96PC2 410 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 HEBP2Q9Y5Z4 205 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 TMEM14AQ9Y6G1 99 aa12.11□□□□□ -0.47
PCNX3-202ENST00000439247 RTTNQ86VV8 2226 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 hCG_1809904A0A1W2PP81 198 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 A0A1W2PR64 198 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 A0A1W2PRV1 198 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 P2RY10O00398 339 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 TNFSF14O43557 240 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 HPGDP15428 266 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 INSM1Q01101 510 aaPredicted RBP12.1□□□□□ -0.47
PCNX3-202ENST00000439247 HGFACQ04756 655 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 TDGQ13569 410 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 CCINQ13939 588 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 KIR2DS3Q14952 304 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 CLEC9AQ6UXN8 241 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 SLC22A18Q96BI1 424 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 CCDC3Q9BQI4 270 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 GSKIPQ9P0R6 139 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 LOC107986453A0A1B0GWG9 222 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 DUS4LO95620 317 aaKnown RBP12.1□□□□□ -0.47
PCNX3-202ENST00000439247 CD2P06729 351 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 CFPP27918 469 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 ARRB1P49407 418 aaPredicted RBP12.1□□□□□ -0.47
PCNX3-202ENST00000439247 CAV2P51636 162 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 TEX30Q5JUR7 227 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 KRBOX4Q5JUW0 171 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 ACER2Q5QJU3 275 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.1□□□□□ -0.47
PCNX3-202ENST00000439247 OR52N4Q8NGI2 321 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 GABRG3Q99928 467 aa12.1□□□□□ -0.47
PCNX3-202ENST00000439247 CDC14CA4D256 554 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 DBX1A6NMT0 343 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 TTLL8A6PVC2 850 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 SSX5O60225 188 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 S100A9P06702 114 aaKnown RBP12.09□□□□□ -0.47
PCNX3-202ENST00000439247 HEXAP06865 529 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 SNRNP70P08621 437 aaKnown RBP12.09□□□□□ -0.47
PCNX3-202ENST00000439247 NQO2P16083 231 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 DRAM2Q6UX65 266 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 PGAP1Q75T13 922 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 CATSPERDQ86XM0 798 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 TCEAL3Q969E4 200 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 C8orf44Q96CB5 159 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 ZNF587Q96SQ5 575 aaPredicted RBP12.09□□□□□ -0.47
PCNX3-202ENST00000439247 ZNF251Q9BRH9 671 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 HRASLS2Q9NWW9 162 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 XKRYO14609 159 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 TXNDC12O95881 172 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 IFNA6P05013 189 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 OR8U9P0C7N5 309 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 SRFP11831 508 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 RAB38P57729 211 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 S100A10P60903 97 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 SKP2Q13309 424 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 RAB32Q13637 225 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 MEF2DQ14814 521 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 ACKR1Q16570 336 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 ZNF542PQ5EBM4 170 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 OR8U1Q8NH10 309 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 TMEM230Q96A57 120 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 SULT4A1Q9BR01 284 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 G6PC3Q9BUM1 346 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 SMIM3Q9BZL3 60 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms