RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 KCNJ8Q15842 424 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 PRR31Q5SQ13 230 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 GPR157Q5UAW9 335 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 TBPL2Q6SJ96 375 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 SMARCD3Q6STE5 483 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 FBXW12Q6X9E4 464 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 DPY19L2P2Q6ZN68 376 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 Q6ZR03 302 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 MRPL21Q7Z2W9 205 aaKnown RBP6.51□□□□□ -1.37
VPS50-204ENST00000438395 FAM122BQ7Z309 247 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 MOGAT3Q86VF5 341 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 KLBQ86Z14 1044 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 SLC7A13Q8TCU3 470 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 SPRYD4Q8WW59 207 aaPredicted RBP6.51□□□□□ -1.37
VPS50-204ENST00000438395 RAB40AQ8WXH6 277 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 TECTBQ96PL2 329 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 PITX2Q99697 317 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 COQ7Q99807 217 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 NUAK2Q9H093 628 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 NSRP1Q9H0G5 558 aaKnown RBP6.51□□□□□ -1.37
VPS50-204ENST00000438395 WDR76Q9H967 626 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 UNKLQ9H9P5 680 aaKnown RBP6.51□□□□□ -1.37
VPS50-204ENST00000438395 EFCAB1Q9HAE3 211 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 TMEM100Q9NV29 134 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 CMTM6Q9NX76 183 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 VSX1Q9NZR4 365 aaPredicted RBP6.51□□□□□ -1.37
VPS50-204ENST00000438395 SAMD4AQ9UPU9 718 aaKnown RBP6.51□□□□□ -1.37
VPS50-204ENST00000438395 POLR3KQ9Y2Y1 108 aaPredicted RBP6.51□□□□□ -1.37
VPS50-204ENST00000438395 IER3IP1Q9Y5U9 82 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 PKD1L1Q8TDX9 2849 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 NOTCH1P46531 2555 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 IGHV2-70DA0A0C4DH43 119 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 F5H5K5 113 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 F5H5P2 479 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 CLDN34H7C241 214 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 PHYHO14832 338 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 ENSAO43768 121 aaKnown RBP6.5□□□□□ -1.37
VPS50-204ENST00000438395 PPP1R3DO95685 299 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 LCATP04180 440 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 DBHP09172 617 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 WNT2P09544 360 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 PPIAL4GP0DN37 164 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 NCK1P16333 377 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 RHCEP18577 417 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 IFNGR2P38484 337 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 GSK3BP49841 420 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 ERFP50548 548 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 HNRNPA0Q13151 305 aaKnown RBP6.5□□□□□ -1.37
VPS50-204ENST00000438395 FHL1Q13642 323 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 KLF17Q5JT82 389 aaPredicted RBP6.5□□□□□ -1.37
VPS50-204ENST00000438395 OTPQ5XKR4 325 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 LEG1Q6P5S2 330 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 CORO6Q6QEF8 472 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 C17orf107Q6ZR85 190 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 DCDC5Q6ZRR9 648 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 SLC15A3Q8IY34 581 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 BCL6BQ8N143 479 aaPredicted RBP6.5□□□□□ -1.37
VPS50-204ENST00000438395 OR4C15Q8NGM1 316 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 ZNF420Q8TAQ5 688 aaPredicted RBP6.5□□□□□ -1.37
VPS50-204ENST00000438395 SPTSSAQ969W0 71 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 MCUR1Q96AQ8 359 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 CMTM5Q96DZ9 223 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 ERMAPQ96PL5 475 aaPredicted RBP6.5□□□□□ -1.37
VPS50-204ENST00000438395 SIGLEC11Q96RL6 698 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 GPX7Q96SL4 187 aaPredicted RBP6.5□□□□□ -1.37
VPS50-204ENST00000438395 ATF6BQ99941 703 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 SLC30A2Q9BRI3 323 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 NUDT16L1Q9BRJ7 211 aaKnown RBP6.5□□□□□ -1.37
VPS50-204ENST00000438395 IFT27Q9BW83 186 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 C1QTNF5Q9BXJ0 243 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 ZNF696Q9H7X3 374 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 FN3KRPQ9HA64 309 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 SPAG4Q9NPE6 437 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 NRIP3Q9NQ35 241 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 ADA2Q9NZK5 511 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 SIGLEC7Q9Y286 467 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 V9GYQ6 96 aa6.5□□□□□ -1.37
VPS50-204ENST00000438395 TRBV4-1A0A0J9YWV2 114 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 A0A1B0GUS0 222 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 GGT3PA6NGU5 568 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 A6NLC8 198 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 IQCF6A8MYZ5 107 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 NME4O00746 187 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 KNG1P01042 644 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 IGHV4-38-2P0DP08 117 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 ZNF823P16415 610 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 ZNF26P17031 533 aaPredicted RBP6.49□□□□□ -1.37
VPS50-204ENST00000438395 CD80P33681 288 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 GGT2P36268 569 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 TPTEP56180 551 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 FGF12P61328 243 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 SPIBQ01892 262 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 PAX8Q06710 450 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 MZT1Q08AG7 82 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 COX10Q12887 443 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 TRAP1Q12931 704 aaKnown RBP6.49□□□□□ -1.37
VPS50-204ENST00000438395 SLC9A3R2Q15599 337 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 OR8G1Q15617 311 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 OR8B8Q15620 311 aa6.49□□□□□ -1.37
VPS50-204ENST00000438395 KCNMB1Q16558 191 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms