RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 CXCR2P25025 360 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 HMGB2P26583 209 aaKnown RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 CRABP1P29762 137 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 NTSP30990 170 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 DDOSTP39656 456 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 NBL1P41271 181 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 SLC1A1P43005 524 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 CRYBB2P43320 205 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 RPL29P47914 159 aaKnown RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 FGF8P55075 233 aaPredicted RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 TMEM33P57088 247 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 LINC00315P59091 139 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 RND3P61587 244 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 RPS15AP62244 130 aaKnown RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 FLI1Q01543 452 aaPredicted RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 AESQ08117 197 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 DAZ2Q13117 558 aaKnown RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 TMED2Q15363 201 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 GABRA6Q16445 453 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 NDUFA9Q16795 377 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 LRRC36Q1X8D7 754 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 CHRFAM7AQ494W8 412 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 TP53I3Q53FA7 332 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 PIGGQ5H8A4 983 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 CCNJQ5T5M9 372 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 ANKRD26P1Q6NSI1 321 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 BTNL3Q6UXE8 466 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 TMEM184AQ6ZMB5 413 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 ZNF836Q6ZNA1 936 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 Q7L0L9 218 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 NET1Q7Z628 596 aaPredicted RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 IFNEQ86WN2 208 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 PLA2G4DQ86XP0 818 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 WDFY1Q8IWB7 410 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 MFSD6LQ8IWD5 586 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 PDIK1LQ8N165 341 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 Q8N402 240 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 BPIFB2Q8N4F0 458 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 INO80EQ8NBZ0 244 aaPredicted RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 OR5B17Q8NGF7 314 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 OR4A4PQ8NGN8 299 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 OR2V1Q8NHB1 315 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 LGALS14Q8TCE9 139 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 RNASEH2CQ8TDP1 164 aaKnown RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 PHF10Q8WUB8 498 aaKnown RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 BAALCQ8WXS3 180 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 SMARCD2Q92925 531 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 ISOC2Q96AB3 205 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 APH1AQ96BI3 265 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 C8orf44Q96CB5 159 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 TMEM101Q96IK0 257 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 ZFP3Q96NJ6 502 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 WFIKKN1Q96NZ8 548 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 KCNA7Q96RP8 456 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 TBX15Q96SF7 602 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 EBNA1BP2Q99848 306 aaKnown RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 TMEM109Q9BVC6 243 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 PLGRKTQ9HBL7 147 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 IFT46Q9NQC8 304 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 DAZ3Q9NR90 486 aaKnown RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 SLC17A5Q9NRA2 495 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 ARMC1Q9NVT9 282 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 NLE1Q9NVX2 485 aaPredicted RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 SPRR3Q9UBC9 169 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 IKZF2Q9UKS7 526 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 SLC22A13Q9Y226 551 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 HEY1Q9Y5J3 304 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 SLC22A7Q9Y694 548 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 METP08581 1390 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 CCDC7Q96M83 1385 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 NUP160Q12769 1436 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 CNTLNQ9NXG0 1405 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 PCDH11XQ9BZA7 1347 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 MAP3K5Q99683 1374 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 PLEKHG1Q9ULL1 1385 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 FAM74A7A6NL05 159 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 VSTM2BA6NLU5 285 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 ATP6V1G2-DDX39BF2Z307 99 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 G3V4G9 280 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 H0Y980 276 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 K7ENP7 123 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 SULT1C2O00338 296 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 MSH4O15457 936 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 ARPC5O15511 151 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 TAPBPO15533 448 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 SGCEO43556 437 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 CCNKO75909 580 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 SNAP29O95721 258 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 OR8U8P0C7N1 319 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 MYL2P10916 166 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 ANXA3P12429 323 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 KITLGP21583 273 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 ELK4P28324 431 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 SLCO1A2P46721 670 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 NOVA1P51513 510 aaKnown RBP2.03□□□□□ -2.08
CLK1-204ENST00000432425 EFNB2P52799 333 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 TAS2R60P59551 318 aa2.03□□□□□ -2.08
CLK1-204ENST00000432425 MAGOHP61326 146 aaKnown RBP2.03□□□□□ -2.08
CLK1-204ENST00000432425 RPS14P62263 151 aaKnown RBP2.03□□□□□ -2.08
CLK1-204ENST00000432425 OGDHQ02218 1023 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms