RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 RFX4Q33E94 735 aa11.89□□□□□ -0.51
SMARCE1-205ENST00000431889 SNAI3Q3KNW1 292 aa11.89□□□□□ -0.51
SMARCE1-205ENST00000431889 ZNF404Q494X3 552 aa11.89□□□□□ -0.51
SMARCE1-205ENST00000431889 HIST2H3PS2Q5TEC6 136 aa11.89□□□□□ -0.51
SMARCE1-205ENST00000431889 BTNL3Q6UXE8 466 aa11.89□□□□□ -0.51
SMARCE1-205ENST00000431889 HIST2H3AQ71DI3 136 aa11.89□□□□□ -0.51
SMARCE1-205ENST00000431889 MUC20Q8N307 709 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-205ENST00000431889 OR10S1Q8NGN2 331 aa11.89□□□□□ -0.51
SMARCE1-205ENST00000431889 OR2AE1Q8NHA4 323 aa11.89□□□□□ -0.51
SMARCE1-205ENST00000431889 NEIL1Q96FI4 390 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-205ENST00000431889 COQ7Q99807 217 aa11.89□□□□□ -0.51
SMARCE1-205ENST00000431889 WACQ9BTA9 647 aa11.89□□□□□ -0.51
SMARCE1-205ENST00000431889 MMADHCQ9H3L0 296 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-205ENST00000431889 ABCD2Q9UBJ2 740 aa11.89□□□□□ -0.51
SMARCE1-205ENST00000431889 LRCH1Q9Y2L9 728 aa11.89□□□□□ -0.51
SMARCE1-205ENST00000431889 FAM20BO75063 409 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 TXNDC12O95881 172 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 RENP00797 406 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 NOS3P29474 1203 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 PITPNBP48739 271 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 RGS6P49758 472 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 COX10Q12887 443 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 PPP1R8Q12972 351 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 SPATC1Q76KD6 591 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 OR8B3Q8NGG8 313 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 RAB40AQ8WXH6 277 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 SLC25A28Q96A46 364 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 MAP6Q96JE9 813 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 COG8Q96MW5 612 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 TECTBQ96PL2 329 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 OR8B2Q96RD0 313 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 ATF6BQ99941 703 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 NUDT16L1Q9BRJ7 211 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 PCGF1Q9BSM1 259 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 HCAR1Q9BXC0 346 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 HDHD2Q9H0R4 259 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 CCDC134Q9H6E4 229 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 MARCH7Q9H992 704 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 PNRC2Q9NPJ4 139 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 MRPL22Q9NWU5 206 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 MGAM2Q2M2H8 2515 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 C22orf46C9J442 243 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 RNASE1P07998 156 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 SLC2A1P11166 492 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 TUBG1P23258 451 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 CRABP1P29762 137 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 RRM2P31350 389 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 SLC6A6P31641 620 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 GGT2P36268 569 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 ELF3P78545 371 aaPredicted RBP11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 PRB3Q04118 309 aaPredicted RBP11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 TRAP1Q12931 704 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 TUSC1Q2TAM9 212 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 DNM1P34Q6PK57 102 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 ZNF826PQ6ZT77 177 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 PDZD9Q8IXQ8 264 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 FGFRL1Q8N441 504 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 OR2AJ1Q8NGZ0 328 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 SPRYD4Q8WW59 207 aaPredicted RBP11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 PYURFQ96I23 114 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 SPAG4Q9NPE6 437 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 TUBG2Q9NRH3 451 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 CTSZQ9UBR2 303 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 CLN8Q9UBY8 286 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 MIOXQ9UGB7 285 aa11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 SAMD4AQ9UPU9 718 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-205ENST00000431889 GRPP07492 148 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 IRF2P14316 349 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 ZNF92Q03936 586 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 OR8G1Q15617 311 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 KRTAP27-1Q3LI81 207 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 SHISA2Q6UWI4 295 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 LRRN1Q6UXK5 716 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 HACD2Q6Y1H2 254 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 PGAP1Q75T13 922 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 MRPL21Q7Z2W9 205 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 FITM2Q8N6M3 262 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 OR9Q2Q8NGE9 314 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 OR9Q1Q8NGQ5 310 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 ZDHHC16Q969W1 377 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 UPRTQ96BW1 309 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 DHRS1Q96LJ7 313 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 PPP1R3EQ9H7J1 279 aa11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 KRCC1Q9NPI7 259 aaPredicted RBP11.87□□□□□ -0.51
SMARCE1-205ENST00000431889 IGHV3OR15-7A0A075B7D8 119 aa11.86□□□□□ -0.51
SMARCE1-205ENST00000431889 LRRC30A6NM36 301 aa11.86□□□□□ -0.51
SMARCE1-205ENST00000431889 PLATP00750 562 aa11.86□□□□□ -0.51
SMARCE1-205ENST00000431889 SEMG1P04279 462 aa11.86□□□□□ -0.51
SMARCE1-205ENST00000431889 GYPBP06028 91 aa11.86□□□□□ -0.51
SMARCE1-205ENST00000431889 PRKXP51817 358 aa11.86□□□□□ -0.51
SMARCE1-205ENST00000431889 GLYATL3Q5SZD4 288 aa11.86□□□□□ -0.51
SMARCE1-205ENST00000431889 WDR25Q64LD2 544 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-205ENST00000431889 ZNF841Q6ZN19 808 aa11.86□□□□□ -0.51
SMARCE1-205ENST00000431889 COLCA1Q6ZS62 124 aa11.86□□□□□ -0.51
SMARCE1-205ENST00000431889 KIR3DL3Q8N743 410 aa11.86□□□□□ -0.51
SMARCE1-205ENST00000431889 DACT3Q96B18 629 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-205ENST00000431889 TMIGD2Q96BF3 282 aa11.86□□□□□ -0.51
SMARCE1-205ENST00000431889 PLEKHA8Q96JA3 519 aa11.86□□□□□ -0.51
SMARCE1-205ENST00000431889 ADAT1Q9BUB4 502 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms