RNA–Protein interactions for RNA: ENST00000430374.5

SMARCAL1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-207ENST00000430374 KCTD18Q6PI47 426 aaPredicted RBP8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 LRRN1Q6UXK5 716 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 SPNS3Q6ZMD2 512 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 ZNF679Q8IYX0 411 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 RFLNBQ8N5W9 214 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 SETD9Q8NE22 299 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 FBLIM1Q8WUP2 373 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 SPSB4Q96A44 273 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 HAVCR1Q96D42 359 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 RNFT2Q96EX2 444 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 PERPQ96FX8 193 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 MROQ9BYG7 248 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 VCX3BQ9H321 246 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 MS4A5Q9H3V2 200 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 BARX1Q9HBU1 254 aaPredicted RBP8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 MRPS18AQ9NVS2 196 aaKnown RBP8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 AASSQ9UDR5 926 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 GPR160Q9UJ42 338 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 EXOGQ9Y2C4 368 aaKnown RBP8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 RRP15Q9Y3B9 282 aaKnown RBP8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 LRP12Q9Y561 859 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 ROS1P08922 2347 aa8.12□□□□□ -1.11
SMARCAL1-207ENST00000430374 CACNA1DQ01668 2161 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 MAST4O15021 2626 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 A0A1W2PQL4 384 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 ZNF670-ZNF695F2Z2N8 137 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 APOL3O95236 402 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 F12P00748 615 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 ADH4P08319 380 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 ADRA2AP08913 450 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 SLC2A1P11166 492 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 ANOS1P23352 680 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 ATP6V1E1P36543 226 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 LIPAP38571 399 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 ALDH3B1P43353 468 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 MMP16P51512 607 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 PRKXP51817 358 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 EFNA4P52798 201 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 AQP4P55087 323 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 ZNF121P58317 390 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 ACTC1P68032 377 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 ACTA1P68133 377 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 IL5RAQ01344 420 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 MALLQ13021 153 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 GK2Q14410 553 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 HLXQ14774 488 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 NKPD1Q17RQ9 610 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 ZNF684Q5T5D7 378 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 SHEQ5VZ18 495 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 ZNF322Q6U7Q0 402 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 DNM1P46Q6ZS02 220 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 SSX6Q7RTT6 188 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 KRT77Q7Z794 578 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 ZNF283Q8N7M2 679 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 OR52H1Q8NGJ2 320 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 CMBLQ96DG6 245 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 SORCS2Q96PQ0 1159 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 REPIN1Q9BWE0 567 aaKnown RBP8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 OPA3Q9H6K4 179 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 SP140LQ9H930 580 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 DYNLRB1Q9NP97 96 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 CYSLTR2Q9NS75 346 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 PTTG3PQ9NZH4 202 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 TAAR3PQ9P1P4 343 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 PURGQ9UJV8 347 aaKnown RBP8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 RPL36Q9Y3U8 105 aaKnown RBP8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 PCDHGB1Q9Y5G3 927 aa8.11□□□□□ -1.11
SMARCAL1-207ENST00000430374 A0A1B0GWJ7 208 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 C5orf63A6NC05 138 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 ACOD1A6NK06 481 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 C17orf100A8MU93 164 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 NDUFS7O75251 213 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 SRSF10O75494 262 aaKnown RBP8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 SULT1C4O75897 302 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 IGHA1P01876 353 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 MT-ND5P03915 603 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 ERCC1P07992 297 aaPredicted RBP8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 NAT2P11245 290 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 ZNF85Q03923 595 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 ZNF92Q03936 586 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 RAB40BQ12829 278 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 SMN1Q16637 294 aaKnown RBP8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 PCGF3Q3KNV8 242 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 ZMAT1Q5H9K5 638 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 Q5PR19 223 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 GLYATL3Q5SZD4 288 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 PGAP1Q75T13 922 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 C8orf59Q8N0T1 100 aaPredicted RBP8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 ZCCHC24Q8N2G6 241 aaKnown RBP8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 OR10H4Q8NGA5 316 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 CNIH3Q8TBE1 160 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 SNX33Q8WV41 574 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 NEU4Q8WWR8 484 aaPredicted RBP8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 LGALS12Q96DT0 336 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 JAM3Q9BX67 310 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 RAB1BQ9H0U4 201 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 OR10A2Q9H208 303 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 RGCCQ9H4X1 137 aa8.1□□□□□ -1.11
SMARCAL1-207ENST00000430374 FAM206AQ9NX38 181 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms