RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 PLPP6Q8IY26 295 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 UBALD2Q8IYN6 164 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 OR13F1Q8NGS4 319 aa13.97□□□□□ -0.17
PTPRF-206ENST00000429895 SERTM1A2A2V5 107 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 TMEM200CA6NKL6 621 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 ANGPTL7O43827 346 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 ZNF90Q03938 601 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 DUSP8Q13202 625 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 DOC2BQ14184 412 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 ANKRD33Q7Z3H0 272 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 KLHDC8BQ8IXV7 354 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 OR10P1Q8NGE3 313 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 PHYHIPQ92561 330 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 AKR1E2Q96JD6 320 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 PRSS37A4D1T9 235 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 FOXF1Q12946 379 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 PCK2Q16822 640 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 PLA1AQ53H76 456 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 HIST2H3AQ71DI3 136 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 MARC2Q969Z3 335 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 BTF3L4Q96K17 158 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 FCGR2CP31995 323 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 GPM6AP51674 278 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 DGCR2P98153 550 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 AGBL4Q5VU57 503 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 SLC25A26Q70HW3 274 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 LILRB4Q8NHJ6 448 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 MOB3AQ96BX8 217 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 OR2A14Q96R47 310 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 MOB1AQ9H8S9 216 aa13.96□□□□□ -0.17
PTPRF-206ENST00000429895 TCAPO15273 167 aa13.96□□□□□ -0.18
PTPRF-206ENST00000429895 TAS2R45P59539 299 aa13.96□□□□□ -0.18
PTPRF-206ENST00000429895 NUDCD2Q8WVJ2 157 aa13.96□□□□□ -0.18
PTPRF-206ENST00000429895 OR6C68A6NDL8 312 aa13.96□□□□□ -0.18
PTPRF-206ENST00000429895 PDGFAP04085 211 aa13.96□□□□□ -0.18
PTPRF-206ENST00000429895 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.96□□□□□ -0.18
PTPRF-206ENST00000429895 S1PR5Q9H228 398 aa13.96□□□□□ -0.18
PTPRF-206ENST00000429895 LIN7CQ9NUP9 197 aaKnown RBP13.96□□□□□ -0.18
PTPRF-206ENST00000429895 TOX4O94842 621 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 ADRA2CP18825 462 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 EMC4Q5J8M3 183 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 DRAM2Q6UX65 266 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 PTRH1Q86Y79 214 aaKnown RBP13.95□□□□□ -0.18
PTPRF-206ENST00000429895 FBXL14Q8N1E6 418 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 C14orf79Q96F83 325 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 MAGT1Q9H0U3 335 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 ARNTP27540 789 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 BTNL8Q6UX41 500 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 ZNF620Q6ZNG0 422 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 TGIF2Q9GZN2 237 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 CTSLP07711 333 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 OR1C1Q15619 314 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 DLEU7Q6UYE1 221 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 ALKBH3Q96Q83 286 aaPredicted RBP13.95□□□□□ -0.18
PTPRF-206ENST00000429895 TAAR9Q96RI9 348 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 COX7A2P2O60397 106 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 BPIFB3P59826 476 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 PRSS36Q5K4E3 855 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 OR10V1Q8NGI7 309 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 ST8SIA1Q92185 356 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 DLL4Q9NR61 685 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 RGPD2P0DJD1 1756 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 URB1O60287 2271 aaKnown RBP13.95□□□□□ -0.18
PTPRF-206ENST00000429895 A0A087WZY1 265 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 GOSR1O95249 250 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 ZNF121P58317 390 aaPredicted RBP13.95□□□□□ -0.18
PTPRF-206ENST00000429895 SNRPNP63162 240 aaKnown RBP13.95□□□□□ -0.18
PTPRF-206ENST00000429895 PRDX4Q13162 271 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 RPUSD4Q96CM3 377 aaKnown RBP13.95□□□□□ -0.18
PTPRF-206ENST00000429895 CMC2Q9NRP2 79 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 PSENENQ9NZ42 101 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 ARL2-SNX15V9GYD0 113 aa13.95□□□□□ -0.18
PTPRF-206ENST00000429895 RAB19A4D1S5 217 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 ACOT8O14734 319 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 GNG10P50151 68 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 OR2Z1Q8NG97 314 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 OR2V1Q8NHB1 315 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 ACY3Q96HD9 319 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 ANKRD12Q6UB98 2062 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 ZNF785A8K8V0 405 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 TMEM196Q5HYL7 178 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 MEX3AA1L020 520 aaKnown RBP13.94□□□□□ -0.18
PTPRF-206ENST00000429895 DEFB124Q8NES8 71 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 MRGPRX4Q96LA9 322 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 NPAP1Q9NZP6 1156 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 ZNF391Q9UJN7 358 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 GDF2Q9UK05 429 aaPredicted RBP13.94□□□□□ -0.18
PTPRF-206ENST00000429895 R4GMQ9 66 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 CLEC12BQ2HXU8 276 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 CAMKMTQ7Z624 323 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 SLC25A46Q96AG3 418 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 TMEM231Q9H6L2 316 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 STRAPQ9Y3F4 350 aaKnown RBP13.94□□□□□ -0.18
PTPRF-206ENST00000429895 ASB1Q9Y576 335 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 LRP3O75074 770 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 CCR2P41597 374 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 ELFN2Q5R3F8 820 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 SPNS2Q8IVW8 549 aa13.94□□□□□ -0.18
PTPRF-206ENST00000429895 RBPMSQ93062 196 aaKnown RBP13.94□□□□□ -0.18
PTPRF-206ENST00000429895 ORAI1Q96D31 301 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms