RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ACOT7LQ6ZUV0 252 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 SLC29A4Q7RTT9 530 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 SLC16A13Q7RTY0 426 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 NUP54Q7Z3B4 507 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 HSD17B13Q7Z5P4 300 aaPredicted RBP11.14□□□□□ -0.63
CDH3-202ENST00000429102 OR4K17Q8NGC6 315 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 NANPQ8TBE9 248 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 SP7Q8TDD2 431 aaPredicted RBP11.14□□□□□ -0.63
CDH3-202ENST00000429102 MTIF3Q9H2K0 278 aaKnown RBP11.14□□□□□ -0.63
CDH3-202ENST00000429102 CTSFQ9UBX1 484 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 A0A0D9SG52 128 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 KIR2DS5A0A0G2JLQ3 304 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 A0A0G2JNG1 304 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 ZNF878C9JN71 531 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 KIR2DS3K7RE56 304 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 ANOS1P23352 680 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 GLRA1P23415 457 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 DHPSP49366 369 aaPredicted RBP11.14□□□□□ -0.63
CDH3-202ENST00000429102 CLDN6P56747 220 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 MFAP5Q13361 173 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 KIR2DS5Q14953 304 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 C1orf53Q5VUE5 145 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 CMTM3Q96MX0 182 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 ZNF578Q96N58 590 aaPredicted RBP11.14□□□□□ -0.63
CDH3-202ENST00000429102 PRMT8Q9NR22 394 aaPredicted RBP11.14□□□□□ -0.63
CDH3-202ENST00000429102 FAM221AA4D161 298 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 BCL2L11O43521 198 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 IGHV4-34P06331 123 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 GP1BAP07359 652 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 NAA40Q86UY6 237 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 NAXDQ8IW45 347 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 C9orf40Q8IXQ3 194 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 CCDC36Q8IYA8 594 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 GPBAR1Q8TDU6 330 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 C8orf44Q96CB5 159 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 SLC25A21Q9BQT8 299 aaPredicted RBP11.14□□□□□ -0.63
CDH3-202ENST00000429102 TNFSF18Q9UNG2 199 aa11.14□□□□□ -0.63
CDH3-202ENST00000429102 KNTC1P50748 2209 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 SPTY2D1-AS1A0A0U1RR47 76 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 WIPF3A6NGB9 483 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 NSA2O95478 260 aaKnown RBP11.13□□□□□ -0.63
CDH3-202ENST00000429102 IL33O95760 270 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 S100A9P06702 114 aaKnown RBP11.13□□□□□ -0.63
CDH3-202ENST00000429102 ZNF93P35789 620 aaPredicted RBP11.13□□□□□ -0.63
CDH3-202ENST00000429102 TNFRSF4P43489 277 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 PPICP45877 212 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 RABIFP47224 123 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 OR3A4PP47883 348 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 SGCAQ16586 387 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 LYG2Q86SG7 212 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 ZNF440Q8IYI8 595 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 PMM1Q92871 262 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 RRNAD1Q96FB5 475 aaKnown RBP11.13□□□□□ -0.63
CDH3-202ENST00000429102 LIN37Q96GY3 246 aaPredicted RBP11.13□□□□□ -0.63
CDH3-202ENST00000429102 MRI1Q9BV20 369 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 DNTTIP1Q9H147 329 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 FANCFQ9NPI8 374 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 OR5AC2Q9NZP5 309 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 KLRF1Q9NZS2 232 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 SGCEO43556 437 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 BGLAPP02818 100 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 VSIG8P0DPA2 414 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 RAB3AP20336 220 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 SERPINA2P20848 420 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 CD80P33681 288 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 EFNA3P52797 238 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 C14orf28Q4W4Y0 310 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 SLC25A32Q9H2D1 315 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 ATPIF1Q9UII2 106 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 LSM5Q9Y4Y9 91 aaKnown RBP11.13□□□□□ -0.63
CDH3-202ENST00000429102 MUC3AQ02505 3323 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 PRAMEF26H0Y7S4 382 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 RAB27BO00194 218 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 RER1O15258 196 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 TNFSF12O43508 249 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 KLK2P20151 261 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 PSMB6P28072 239 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 DHODHQ02127 395 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 UNC119Q13432 240 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 FAM57BQ71RH2 274 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 LRRC18Q8N456 261 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 KCNRGQ8N5I3 272 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 TMEM229BQ8NBD8 167 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 SEMA6DQ8NFY4 1073 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 TOMM40LQ969M1 308 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 GABRG3Q99928 467 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 SLC19A3Q9BZV2 496 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 ASH2LQ9UBL3 628 aa11.13□□□□□ -0.63
CDH3-202ENST00000429102 ZNF735P0CB33 412 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 AMY2BP19961 511 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 CSNK1EP49674 416 aaKnown RBP11.12□□□□□ -0.63
CDH3-202ENST00000429102 HSD17B7P56937 341 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 PDZK1IP1Q13113 114 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 SP6Q3SY56 376 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 C11orf40Q8WZ69 217 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 ISOC2Q96AB3 205 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 JSRP1Q96MG2 331 aaPredicted RBP11.12□□□□□ -0.63
CDH3-202ENST00000429102 TXNIPQ9H3M7 391 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 NBEAQ8NFP9 2946 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms