RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 PMF1-BGLAPU3KQ54 211 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 IQCMA0A1B0GVH7 501 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 LOC107986453A0A1B0GWG9 222 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 RAD51DO75771 328 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 CGAP01215 116 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 RAB3BP20337 219 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 CRYGSP22914 178 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 HOXC12P31275 282 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 S100A5P33763 92 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 P2RY6Q15077 328 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 GSG1Q2KHT4 349 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 ZNF433Q8N7K0 673 aaPredicted RBP13.19□□□□□ -0.3
GINS3-203ENST00000426538 OR52H1Q8NGJ2 320 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 TBC1D15Q8TC07 691 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 OR51E1Q8TCB6 317 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 AP3S1Q92572 193 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 KCNS3Q9BQ31 491 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 BARHL1Q9BZE3 327 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 OPN3Q9H1Y3 402 aaPredicted RBP13.19□□□□□ -0.3
GINS3-203ENST00000426538 ATPIF1Q9UII2 106 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 TLN1Q9Y490 2541 aaKnown RBP13.19□□□□□ -0.3
GINS3-203ENST00000426538 ZGRF1Q86YA3 2104 aa13.18□□□□□ -0.3
GINS3-203ENST00000426538 PDCD5O14737 125 aa13.18□□□□□ -0.3
GINS3-203ENST00000426538 PIN1P1O15428 100 aa13.18□□□□□ -0.3
GINS3-203ENST00000426538 TBX1O43435 398 aa13.18□□□□□ -0.3
GINS3-203ENST00000426538 COX5BP10606 129 aa13.18□□□□□ -0.3
GINS3-203ENST00000426538 HOXB1P14653 301 aaPredicted RBP13.18□□□□□ -0.3
GINS3-203ENST00000426538 OPRM1P35372 400 aa13.18□□□□□ -0.3
GINS3-203ENST00000426538 CASP6P55212 293 aa13.18□□□□□ -0.3
GINS3-203ENST00000426538 CAV3P56539 151 aa13.18□□□□□ -0.3
GINS3-203ENST00000426538 GABRA6Q16445 453 aa13.18□□□□□ -0.3
GINS3-203ENST00000426538 LINC00299Q6ZSB3 139 aa13.18□□□□□ -0.3
GINS3-203ENST00000426538 PRSS45Q7RTY3 260 aa13.18□□□□□ -0.3
GINS3-203ENST00000426538 CROCCP3Q8IVE0 287 aa13.18□□□□□ -0.3
GINS3-203ENST00000426538 GABRG1Q8N1C3 465 aa13.18□□□□□ -0.3
GINS3-203ENST00000426538 CPEB3Q8NE35 698 aaKnown RBP13.18□□□□□ -0.3
GINS3-203ENST00000426538 NXF2Q9GZY0 626 aaKnown RBP13.18□□□□□ -0.3
GINS3-203ENST00000426538 CRNNQ9UBG3 495 aaPredicted RBP13.18□□□□□ -0.3
GINS3-203ENST00000426538 CKLFQ9UBR5 152 aa13.18□□□□□ -0.3
GINS3-203ENST00000426538 NCR1O76036 304 aa13.17□□□□□ -0.3
GINS3-203ENST00000426538 LCATP04180 440 aa13.17□□□□□ -0.3
GINS3-203ENST00000426538 COX5AP20674 150 aa13.17□□□□□ -0.3
GINS3-203ENST00000426538 CCNOP22674 350 aa13.17□□□□□ -0.3
GINS3-203ENST00000426538 CFL1P23528 166 aaKnown RBP13.17□□□□□ -0.3
GINS3-203ENST00000426538 STOMP27105 288 aa13.17□□□□□ -0.3
GINS3-203ENST00000426538 APEX1P27695 318 aaKnown RBP13.17□□□□□ -0.3
GINS3-203ENST00000426538 PEX19P40855 299 aa13.17□□□□□ -0.3
GINS3-203ENST00000426538 BMXP51813 675 aa13.17□□□□□ -0.3
GINS3-203ENST00000426538 GFOD2Q3B7J2 385 aa13.17□□□□□ -0.3
GINS3-203ENST00000426538 SFRP5Q5T4F7 317 aa13.17□□□□□ -0.3
GINS3-203ENST00000426538 C1orf162Q8NEQ5 155 aaPredicted RBP13.17□□□□□ -0.3
GINS3-203ENST00000426538 ORAI1Q96D31 301 aa13.17□□□□□ -0.3
GINS3-203ENST00000426538 OR10A2Q9H208 303 aa13.17□□□□□ -0.3
GINS3-203ENST00000426538 PLEKHB1Q9UF11 243 aaPredicted RBP13.17□□□□□ -0.3
GINS3-203ENST00000426538 A0A075B6Q4 140 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 TRBV5-7A0A0A0MS05 114 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 A0A0U1RQV5 110 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 ZNF503-AS2A6NEH8 195 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 ZNF12P17014 697 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 MOGQ16653 247 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 DOK3Q7L591 496 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 ST6GALNAC3Q8NDV1 305 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 GPR84Q9NQS5 396 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 ZNF275Q9NSD4 429 aaPredicted RBP13.16□□□□□ -0.3
GINS3-203ENST00000426538 B3GNT2Q9NY97 397 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 ZNF319Q9P2F9 582 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 ZNF629Q9UEG4 869 aaPredicted RBP13.16□□□□□ -0.3
GINS3-203ENST00000426538 AK6Q9Y3D8 172 aaKnown RBP13.16□□□□□ -0.3
GINS3-203ENST00000426538 PEX16Q9Y5Y5 336 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 INTS1Q8N201 2190 aaKnown RBP13.16□□□□□ -0.3
GINS3-203ENST00000426538 C5orf49A4QMS7 147 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 ANKRD61A6NGH8 418 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 RGS5O15539 181 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 BMP5P22003 454 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 PAX7P23759 505 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 APLNRP35414 380 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 PSMD7P51665 324 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 KRTAP27-1Q3LI81 207 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 TMEM211Q6ICI0 200 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 STAC2Q6ZMT1 411 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 MDP1Q86V88 176 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 CXorf67Q86X51 503 aaPredicted RBP13.16□□□□□ -0.3
GINS3-203ENST00000426538 SERPINA12Q8IW75 414 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 OR6Q1Q8NGQ2 317 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 FGGYQ96C11 551 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 PIGMQ9H3S5 423 aa13.16□□□□□ -0.3
GINS3-203ENST00000426538 TRGV8A0A0C4DH27 118 aa13.15□□□□□ -0.3
GINS3-203ENST00000426538 A0A1B0GTI1 187 aa13.15□□□□□ -0.3
GINS3-203ENST00000426538 MSTNO14793 375 aa13.15□□□□□ -0.3
GINS3-203ENST00000426538 MTRF1O75570 445 aaKnown RBP13.15□□□□□ -0.3
GINS3-203ENST00000426538 MAS1P04201 325 aa13.15□□□□□ -0.3
GINS3-203ENST00000426538 OR10A3P58181 314 aa13.15□□□□□ -0.3
GINS3-203ENST00000426538 TSC22D1Q15714 1073 aa13.15□□□□□ -0.3
GINS3-203ENST00000426538 IDNKQ5T6J7 187 aa13.15□□□□□ -0.3
GINS3-203ENST00000426538 SFXN4Q6P4A7 337 aa13.15□□□□□ -0.3
GINS3-203ENST00000426538 MZT2AQ6P582 158 aa13.15□□□□□ -0.3
GINS3-203ENST00000426538 BOD1Q96IK1 185 aa13.15□□□□□ -0.3
GINS3-203ENST00000426538 FAM71F1Q96KD3 344 aaPredicted RBP13.15□□□□□ -0.3
GINS3-203ENST00000426538 NOX3Q9HBY0 568 aa13.15□□□□□ -0.3
GINS3-203ENST00000426538 FOXJ3Q9UPW0 622 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms