RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 UBAP1Q9NZ09 502 aa12.83□□□□□ -0.36
USB1-202ENST00000423271 ATPIF1Q9UII2 106 aa12.83□□□□□ -0.36
USB1-202ENST00000423271 METRNQ9UJH8 293 aa12.83□□□□□ -0.36
USB1-202ENST00000423271 LOC105371242A0A075B767 164 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 IGHV2-70P01814 119 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 ANPEPP15144 967 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 TUBG1P23258 451 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 CRISP1P54107 249 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 SLC3A1Q07837 685 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 CRMP1Q14194 572 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 RSPO1Q2MKA7 263 aaPredicted RBP12.82□□□□□ -0.36
USB1-202ENST00000423271 KDM4DQ6B0I6 523 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 OR2T2Q6IF00 324 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 SLC27A4Q6P1M0 643 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 CFAP77Q6ZQR2 320 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 PARP8Q8N3A8 854 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 SLC37A3Q8NCC5 494 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 GJC3Q8NFK1 279 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 ITLN1Q8WWA0 313 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 STMN2Q93045 179 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 PTP4A1Q93096 173 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 DCLRE1CQ96SD1 692 aaKnown RBP12.82□□□□□ -0.36
USB1-202ENST00000423271 TMPRSS13Q9BYE2 586 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 HDHD2Q9H0R4 259 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 OCEL1Q9H607 264 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 TUBG2Q9NRH3 451 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 CMC2Q9NRP2 79 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 TMEM106BQ9NUM4 274 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 NPTNQ9Y639 398 aa12.82□□□□□ -0.36
USB1-202ENST00000423271 RIIAD1A6NNX1 92 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 RGS9O75916 674 aaPredicted RBP12.81□□□□□ -0.36
USB1-202ENST00000423271 VENTXO95231 258 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 IFNGP01579 166 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 RAC2P15153 192 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 TNFSF4P23510 183 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 PYCR1P32322 319 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 RGS6P49758 472 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 PRSS12P56730 875 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 CDK5Q00535 292 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 TMEM236Q5W0B7 351 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 SLC18B1Q6NT16 456 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 FBXW12Q6X9E4 464 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 ZBTB46Q86UZ6 589 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 PQLC1Q8N2U9 271 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 OR10AD1Q8NGE0 317 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 OR9Q1Q8NGQ5 310 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 COG8Q96MW5 612 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 OR2V2Q96R30 315 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 CIB1Q99828 191 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 RBM4Q9BWF3 364 aaKnown RBP12.81□□□□□ -0.36
USB1-202ENST00000423271 WDR76Q9H967 626 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 SLC25A19Q9HC21 320 aa12.81□□□□□ -0.36
USB1-202ENST00000423271 A0A0G2JMP0 313 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 A0A0X1KG70 313 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 J3QW42 95 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 BAG2O95816 211 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 SBK2P0C263 348 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 ZNF3P17036 446 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 ADRA2CP18825 462 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 GGT2P36268 569 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 ESRRGP62508 458 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 LCN2P80188 198 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 KRTAP27-1Q3LI81 207 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 PEG10Q86TG7 708 aaKnown RBP12.8□□□□□ -0.36
USB1-202ENST00000423271 ZNF283Q8N7M2 679 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 SEMA6DQ8NFY4 1073 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 OR4M2Q8NGB6 313 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 ZNRF4Q8WWF5 429 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 APOBEC3DQ96AK3 386 aaPredicted RBP12.8□□□□□ -0.36
USB1-202ENST00000423271 SIGLEC11Q96RL6 698 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 RBM4BQ9BQ04 359 aaKnown RBP12.8□□□□□ -0.36
USB1-202ENST00000423271 OSBPL10Q9BXB5 764 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 NMNAT2Q9BZQ4 307 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 PNRC2Q9NPJ4 139 aaKnown RBP12.8□□□□□ -0.36
USB1-202ENST00000423271 MRPL22Q9NWU5 206 aaKnown RBP12.8□□□□□ -0.36
USB1-202ENST00000423271 IL19Q9UHD0 177 aa12.8□□□□□ -0.36
USB1-202ENST00000423271 H0YL77 283 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 EI24O14681 340 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 SURF4O15260 269 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 HLA-DQA2P01906 255 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 GYPBP06028 91 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 CLUP10909 449 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 PSKH1P11801 424 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 TNFRSF1AP19438 455 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 ZFP36P26651 326 aaKnown RBP12.79□□□□□ -0.36
USB1-202ENST00000423271 EPHA2P29317 976 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 RPS27P42677 84 aaKnown RBP12.79□□□□□ -0.36
USB1-202ENST00000423271 MMP16P51512 607 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 PTGES3Q15185 160 aaKnown RBP12.79□□□□□ -0.36
USB1-202ENST00000423271 ZMYND11Q15326 602 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 DCAF12L2Q5VW00 463 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 LYPD4Q6UWN0 246 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.79□□□□□ -0.36
USB1-202ENST00000423271 BHLHE23Q8NDY6 225 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 PROKR2Q8NFJ6 384 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 OR51L1Q8NGJ5 315 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 OR5L1Q8NGL2 311 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 OR2T4Q8NH00 348 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 PITX2Q99697 317 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 HCAR1Q9BXC0 346 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms