RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 ZNF747Q9BV97 191 aa14.53□□□□□ -0.08
MSH6-203ENST00000420813 CDADC1Q9BWV3 514 aa14.53□□□□□ -0.08
MSH6-203ENST00000420813 WDR76Q9H967 626 aa14.53□□□□□ -0.08
MSH6-203ENST00000420813 KCNG2Q9UJ96 466 aa14.53□□□□□ -0.08
MSH6-203ENST00000420813 V9GYQ6 96 aa14.53□□□□□ -0.08
MSH6-203ENST00000420813 OR6C68A6NDL8 312 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 F5H5K5 113 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 CLDN34H7C241 214 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 ZNF205O95201 554 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 GGT2P36268 569 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 CD200P41217 278 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 TRAP1Q12931 704 aaKnown RBP14.52□□□□□ -0.09
MSH6-203ENST00000420813 MALLQ13021 153 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 BAMBIQ13145 260 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 ZNF620Q6ZNG0 422 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 PARP8Q8N3A8 854 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 OR8B3Q8NGG8 313 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 OR52E2Q8NGJ4 325 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 Q8TCH9 128 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 RAB40AQ8WXH6 277 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 C1orf147Q96MC9 270 aaPredicted RBP14.52□□□□□ -0.09
MSH6-203ENST00000420813 ZNF48Q96MX3 618 aaPredicted RBP14.52□□□□□ -0.09
MSH6-203ENST00000420813 OR8B2Q96RD0 313 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 MS4A7Q9GZW8 240 aaPredicted RBP14.52□□□□□ -0.09
MSH6-203ENST00000420813 PNRC2Q9NPJ4 139 aaKnown RBP14.52□□□□□ -0.09
MSH6-203ENST00000420813 TMCC3Q9ULS5 477 aa14.52□□□□□ -0.09
MSH6-203ENST00000420813 PKD1L1Q8TDX9 2849 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 PLATP00750 562 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 HLA-DQA2P01906 255 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 LCATP04180 440 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 HLA-DPB1P04440 258 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 FABP3P05413 133 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 RNASE1P07998 156 aaKnown RBP14.51□□□□□ -0.09
MSH6-203ENST00000420813 IRF2P14316 349 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 RRM2P31350 389 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 PMELP40967 661 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 MTNR1AP48039 350 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 TPTEP56180 551 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 TSPAN31Q12999 210 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 SAMD4BQ5PRF9 694 aaKnown RBP14.51□□□□□ -0.09
MSH6-203ENST00000420813 RPL13AP3Q6NVV1 102 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 SHISA2Q6UWI4 295 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 DCDC5Q6ZRR9 648 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 PGAM4Q8N0Y7 254 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 SDR9C7Q8NEX9 313 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 GNPDA2Q8TDQ7 276 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 SLC25A28Q96A46 364 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 NSMCE2Q96MF7 247 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 SLC22A4Q9H015 551 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 NSRP1Q9H0G5 558 aaKnown RBP14.51□□□□□ -0.09
MSH6-203ENST00000420813 IL1RAPQ9NPH3 570 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 MRPL22Q9NWU5 206 aaKnown RBP14.51□□□□□ -0.09
MSH6-203ENST00000420813 CD300AQ9UGN4 299 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 NOP16Q9Y3C1 178 aaKnown RBP14.51□□□□□ -0.09
MSH6-203ENST00000420813 PCDHGB1Q9Y5G3 927 aa14.51□□□□□ -0.09
MSH6-203ENST00000420813 KIR2DS1A0A191URI9 304 aa14.5□□□□□ -0.09
MSH6-203ENST00000420813 PHYHO14832 338 aa14.5□□□□□ -0.09
MSH6-203ENST00000420813 SNX3O60493 162 aa14.5□□□□□ -0.09
MSH6-203ENST00000420813 IGHV4-38-2P0DP08 117 aa14.5□□□□□ -0.09
MSH6-203ENST00000420813 PITPNBP48739 271 aa14.5□□□□□ -0.09
MSH6-203ENST00000420813 RAD23AP54725 363 aa14.5□□□□□ -0.09
MSH6-203ENST00000420813 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.5□□□□□ -0.09
MSH6-203ENST00000420813 MAB21L1Q13394 359 aa14.5□□□□□ -0.09
MSH6-203ENST00000420813 PGAP1Q75T13 922 aa14.5□□□□□ -0.09
MSH6-203ENST00000420813 OR11L1Q8NGX0 322 aa14.5□□□□□ -0.09
MSH6-203ENST00000420813 MAP6Q96JE9 813 aa14.5□□□□□ -0.09
MSH6-203ENST00000420813 DUX5Q96PT3 197 aa14.5□□□□□ -0.09
MSH6-203ENST00000420813 FN3KQ9H479 309 aa14.5□□□□□ -0.09
MSH6-203ENST00000420813 CLN8Q9UBY8 286 aa14.5□□□□□ -0.09
MSH6-203ENST00000420813 IGHV3-64DA0A0J9YX35 117 aa14.49□□□□□ -0.09
MSH6-203ENST00000420813 M0R135 149 aa14.49□□□□□ -0.09
MSH6-203ENST00000420813 ARPC2O15144 300 aa14.49□□□□□ -0.09
MSH6-203ENST00000420813 ZNF823P16415 610 aa14.49□□□□□ -0.09
MSH6-203ENST00000420813 CBX1P83916 185 aa14.49□□□□□ -0.09
MSH6-203ENST00000420813 DBPQ10586 325 aaPredicted RBP14.49□□□□□ -0.09
MSH6-203ENST00000420813 CLEC12AQ5QGZ9 265 aa14.49□□□□□ -0.09
MSH6-203ENST00000420813 PRR31Q5SQ13 230 aa14.49□□□□□ -0.09
MSH6-203ENST00000420813 FAM201AQ5SY85 155 aa14.49□□□□□ -0.09
MSH6-203ENST00000420813 PGBD2Q6P3X8 592 aa14.49□□□□□ -0.09
MSH6-203ENST00000420813 MRPL21Q7Z2W9 205 aaKnown RBP14.49□□□□□ -0.09
MSH6-203ENST00000420813 NAA40Q86UY6 237 aa14.49□□□□□ -0.09
MSH6-203ENST00000420813 OR52L1Q8NGH7 329 aa14.49□□□□□ -0.09
MSH6-203ENST00000420813 SPRYD4Q8WW59 207 aaPredicted RBP14.49□□□□□ -0.09
MSH6-203ENST00000420813 SPTSSAQ969W0 71 aa14.49□□□□□ -0.09
MSH6-203ENST00000420813 SLCO4A1Q96BD0 722 aa14.49□□□□□ -0.09
MSH6-203ENST00000420813 ZNF799Q96GE5 643 aa14.49□□□□□ -0.09
MSH6-203ENST00000420813 CDH10Q9Y6N8 788 aa14.49□□□□□ -0.09
MSH6-203ENST00000420813 TRAV40A0A0B4J280 105 aa14.48□□□□□ -0.09
MSH6-203ENST00000420813 TMPRSS2O15393 492 aa14.48□□□□□ -0.09
MSH6-203ENST00000420813 FAM20BO75063 409 aa14.48□□□□□ -0.09
MSH6-203ENST00000420813 KRT36O76013 467 aa14.48□□□□□ -0.09
MSH6-203ENST00000420813 PTBP3O95758 552 aaKnown RBP14.48□□□□□ -0.09
MSH6-203ENST00000420813 OTX1P32242 354 aaPredicted RBP14.48□□□□□ -0.09
MSH6-203ENST00000420813 PSMB10P40306 273 aa14.48□□□□□ -0.09
MSH6-203ENST00000420813 NPY4RP50391 375 aa14.48□□□□□ -0.09
MSH6-203ENST00000420813 HMGA2P52926 109 aa14.48□□□□□ -0.09
MSH6-203ENST00000420813 PRSS12P56730 875 aa14.48□□□□□ -0.09
MSH6-203ENST00000420813 IL13RA1P78552 427 aa14.48□□□□□ -0.09
MSH6-203ENST00000420813 SLC9A3R2Q15599 337 aa14.48□□□□□ -0.09
MSH6-203ENST00000420813 SPATS1Q496A3 300 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms