RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 APOBEC3DQ96AK3 386 aaPredicted RBP7.2□□□□□ -1.26
TRIM39-206ENST00000420746 TMEM19Q96HH6 336 aa7.2□□□□□ -1.26
TRIM39-206ENST00000420746 ZIM3Q96PE6 472 aa7.2□□□□□ -1.26
TRIM39-206ENST00000420746 ZNF649Q9BS31 505 aa7.2□□□□□ -1.26
TRIM39-206ENST00000420746 ALG12Q9BV10 488 aa7.2□□□□□ -1.26
TRIM39-206ENST00000420746 TSPYL1Q9H0U9 437 aa7.2□□□□□ -1.26
TRIM39-206ENST00000420746 PTTG3PQ9NZH4 202 aa7.2□□□□□ -1.26
TRIM39-206ENST00000420746 AURKCQ9UQB9 309 aa7.2□□□□□ -1.26
TRIM39-206ENST00000420746 DNAH10Q8IVF4 4471 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 A0A087WUV0 522 aaPredicted RBP7.19□□□□□ -1.26
TRIM39-206ENST00000420746 FAM90A8PA6NJQ4 464 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 E9PBE3 544 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 SGCEO43556 437 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 NDUFB3O43676 98 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 CH25HO95992 272 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 HIST1H2ABP04908 130 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 CHRNGP07510 517 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 FRMD6-AS1P0C7T7 363 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 ETS2P15036 469 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 MSR1P21757 451 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 AZGP1P25311 298 aaKnown RBP7.19□□□□□ -1.26
TRIM39-206ENST00000420746 GCAP28676 217 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 GSK3BP49841 420 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 DYNLT3P51808 116 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 LUMP51884 338 aaPredicted RBP7.19□□□□□ -1.26
TRIM39-206ENST00000420746 CDH12P55289 794 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 DSTNP60981 165 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 FMODQ06828 376 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 CD47Q08722 323 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 OR1Q1Q15612 314 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 MICBQ29980 383 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 LRRC10Q5BKY1 277 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 ARMC4Q5T2S8 1044 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 DHRS4L2Q6PKH6 230 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 ZNF621Q6ZSS3 439 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 HIST3H2AQ7L7L0 130 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 NANOGNBQ7Z5D8 188 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 TMEM219Q86XT9 240 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 BBS10Q8TAM1 723 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 LRRC8CQ8TDW0 803 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 HIST1H2ACQ93077 130 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 C12orf43Q96C57 262 aaKnown RBP7.19□□□□□ -1.26
TRIM39-206ENST00000420746 FOXRED1Q96CU9 486 aaPredicted RBP7.19□□□□□ -1.26
TRIM39-206ENST00000420746 HCAR1Q9BXC0 346 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 EVA1AQ9H8M9 152 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 ABCB10Q9NRK6 738 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 CAPN7Q9Y6W3 813 aa7.19□□□□□ -1.26
TRIM39-206ENST00000420746 OR6C6A6NF89 314 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 CHP2O43745 196 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 SLC25A17O43808 307 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 TRIM13O60858 407 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 FAM153BP0C7A2 387 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 DUX4L4P0CJ87 422 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 PAX6P26367 422 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 S100A3P33764 101 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 CDKN2CP42773 168 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 TGM4P49221 684 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 LGALS4P56470 323 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 ERVFRD-1P60508 538 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 RPL23AP62750 156 aaKnown RBP7.18□□□□□ -1.26
TRIM39-206ENST00000420746 SLC7A5Q01650 507 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 ECH1Q13011 328 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 SELPLGQ14242 412 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 NPTX1Q15818 432 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 WDR38Q5JTN6 314 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 C1orf94Q6P1W5 598 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 ZNF613Q6PF04 617 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 RANBP3LQ86VV4 465 aaPredicted RBP7.18□□□□□ -1.26
TRIM39-206ENST00000420746 C10orf107Q8IVU9 208 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 SLC26A10Q8NG04 563 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 AENQ8WTP8 325 aaKnown RBP7.18□□□□□ -1.26
TRIM39-206ENST00000420746 HDAC2Q92769 488 aaKnown RBP7.18□□□□□ -1.26
TRIM39-206ENST00000420746 KCTD12Q96CX2 325 aaKnown RBP7.18□□□□□ -1.26
TRIM39-206ENST00000420746 RBP7Q96R05 134 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 CCL13Q99616 98 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 DNTTIP1Q9H147 329 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 POLE4Q9NR33 117 aa7.18□□□□□ -1.26
TRIM39-206ENST00000420746 H3BUI4 141 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 LDLRAD4O15165 306 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 GMDSO60547 372 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 CCT5P48643 541 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 RPL18Q07020 188 aaKnown RBP7.17□□□□□ -1.26
TRIM39-206ENST00000420746 OR8G1Q15617 311 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 ATPAF1Q5TC12 328 aaPredicted RBP7.17□□□□□ -1.26
TRIM39-206ENST00000420746 HHATQ5VTY9 493 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 C16orf82Q7Z2V1 217 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 OR2W3Q7Z3T1 314 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 OSR2Q8N2R0 312 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 FAM216BQ8N7L0 139 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 CCDC63Q8NA47 563 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 OR5M8Q8NGP6 311 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 MZB1Q8WU39 189 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 ZNF426Q9BUY5 554 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 HEXA-AS1Q9H8Q6 139 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 RNPEPL1Q9HAU8 725 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 INIPQ9NRY2 104 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 ZFP57Q9NU63 452 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 C1orf123Q9NWV4 160 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 SCOCQ9UIL1 159 aa7.17□□□□□ -1.26
TRIM39-206ENST00000420746 SLC13A4Q9UKG4 626 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms