RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 HIST2H3AQ71DI3 136 aa8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 OAFQ86UD1 273 aa8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 CALHM3Q86XJ0 350 aa8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 GLB1L2Q8IW92 636 aa8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 NRMQ8IXM6 262 aa8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 GALNT4Q8N4A0 578 aa8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 PRRC1Q96M27 445 aa8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 Q96M85 177 aa8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 COQ7Q99807 217 aa8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 HCAR1Q9BXC0 346 aa8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 HDHD2Q9H0R4 259 aa8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 SEMA6AQ9H2E6 1030 aa8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 RABEP2Q9H5N1 569 aa8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 ZFAND3Q9H8U3 227 aa8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 GRHPRQ9UBQ7 328 aa8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 V9GYY5 206 aaPredicted RBP8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 TET2Q6N021 2002 aaPredicted RBP8.4□□□□□ -1.06
TNFAIP3-202ENST00000420009 DNAH9Q9NYC9 4486 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 ELOVL7A1L3X0 281 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 EFCAB9A8MZ26 197 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 XKRYO14609 159 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 OR10H3O60404 316 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 FBP1P09467 338 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 TGFBR2P37173 567 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 SLC9A3P48764 834 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 ARF6P62330 175 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 PRKCDQ05655 676 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 KRR1Q13601 381 aaKnown RBP8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 GK2Q14410 553 aaPredicted RBP8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 HERPUD1Q15011 391 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 KCNMB1Q16558 191 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 RSPO1Q2MKA7 263 aaPredicted RBP8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 CDONQ4KMG0 1287 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 BEND6Q5SZJ8 279 aaPredicted RBP8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 SFRP4Q6FHJ7 346 aaPredicted RBP8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 METAP1DQ6UB28 335 aaPredicted RBP8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 BTN2A1Q7KYR7 527 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 PDZD9Q8IXQ8 264 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 OFCC1Q8IZS5 231 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 MRAPQ8TCY5 172 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 TSPEARQ8WU66 669 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 CFHR4Q92496 578 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 TLCD1Q96CP7 247 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 ITPKCQ96DU7 683 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 ZNF570Q96NI8 536 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 PARD6BQ9BYG5 372 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 SYT4Q9H2B2 425 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 TRIM36Q9NQ86 728 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 UFSP2Q9NUQ7 469 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 RNF7Q9UBF6 113 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 FBLN5Q9UBX5 448 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 KPTNQ9Y664 436 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 LHFPL6Q9Y693 200 aa8.39□□□□□ -1.07
TNFAIP3-202ENST00000420009 PLXNB1O43157 2135 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 TRAV38-1A0A0B4J264 116 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 A0A1B0GVI7 797 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 BTBD17A6NE02 478 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 OOEPA6NGQ2 149 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 FXYD1O00168 92 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 CDC42EP2O14613 210 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 IMPA2O14732 288 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 NDUFA2O43678 99 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 SLC16A7O60669 478 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 KHDRBS3O75525 346 aaKnown RBP8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 ECDO95905 644 aaPredicted RBP8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 RPL4P36578 427 aaKnown RBP8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 EFNB2P52799 333 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 LOXL3P58215 753 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 RABL3Q5HYI8 236 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 SLC35E4Q6ICL7 350 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 Q6ZTK2 550 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 VMO1Q7Z5L0 202 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 FAM90A1Q86YD7 464 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 PLPP7Q8NBV4 271 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 NPRL2Q8WTW4 380 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 STON2Q8WXE9 905 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 PPP1R14AQ96A00 147 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 RASSF4Q9H2L5 321 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 FN3KRPQ9HA64 309 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 NMNAT1Q9HAN9 279 aaPredicted RBP8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 VSX1Q9NZR4 365 aaPredicted RBP8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 RPUSD1Q9UJJ7 312 aaKnown RBP8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 RAB21Q9UL25 225 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 COA3Q9Y2R0 106 aaPredicted RBP8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 POLR1DQ9Y2S0 133 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 CAB39Q9Y376 341 aaPredicted RBP8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 FAM96BQ9Y3D0 163 aa8.38□□□□□ -1.07
TNFAIP3-202ENST00000420009 RNASEK-C17orf49H0YIS7 233 aa8.37□□□□□ -1.07
TNFAIP3-202ENST00000420009 DVL1O14640 695 aa8.37□□□□□ -1.07
TNFAIP3-202ENST00000420009 IFNA14P01570 189 aa8.37□□□□□ -1.07
TNFAIP3-202ENST00000420009 GYPAP02724 150 aa8.37□□□□□ -1.07
TNFAIP3-202ENST00000420009 ACSM4P0C7M7 580 aa8.37□□□□□ -1.07
TNFAIP3-202ENST00000420009 SDHAP31040 664 aa8.37□□□□□ -1.07
TNFAIP3-202ENST00000420009 GABRA5P31644 462 aa8.37□□□□□ -1.07
TNFAIP3-202ENST00000420009 GPR4P46093 362 aa8.37□□□□□ -1.07
TNFAIP3-202ENST00000420009 DBPQ10586 325 aaPredicted RBP8.37□□□□□ -1.07
TNFAIP3-202ENST00000420009 TRAM2Q15035 370 aa8.37□□□□□ -1.07
TNFAIP3-202ENST00000420009 OR8G1Q15617 311 aa8.37□□□□□ -1.07
TNFAIP3-202ENST00000420009 OR8B8Q15620 311 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms