RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 ULBP2Q9BZM5 246 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 MYOZ1Q9NP98 299 aaPredicted RBP12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ZFP64Q9NPA5 681 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 MRPS18BQ9Y676 258 aaKnown RBP12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 WDR87Q6ZQQ6 2873 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 A0A1B0GTI1 187 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 GSTT2P0CG29 244 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TMIGD3P0DMS9 266 aaPredicted RBP12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 GTF2F2P13984 249 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CD59P13987 128 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CNR1P21554 472 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 MPZP25189 248 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 EIF1AXP47813 144 aaKnown RBP12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 VEGFCP49767 419 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SPOCK1Q08629 439 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 LINC00303Q3SY05 128 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ZNF626Q68DY1 528 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TCEAL6Q6IPX3 200 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 STEAP1BQ6NZ63 245 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TMEM53Q6P2H8 277 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 MEIOBQ8N635 442 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ZNF283Q8N7M2 679 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OR11H7Q8NGC8 314 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OR51A2Q8NGJ7 313 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OR4C16Q8NGL9 310 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OR1J2Q8NGS2 313 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TCEAL3Q969E4 200 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ZNF416Q9BWM5 594 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SLC2A8Q9NY64 477 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 RHBDD3Q9Y3P4 386 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 NCOR1O75376 2440 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 A0A0J9YW62 118 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OR6C65A6NJZ3 312 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 RAD1O60671 282 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 GIPP09681 153 aaPredicted RBP12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 THBS4P35443 961 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ZNF93P35789 620 aaPredicted RBP12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ALDH3B1P43353 468 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 EFNB2P52799 333 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SCRN3Q0VDG4 424 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 PMPCAQ10713 525 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SF3B4Q15427 424 aaKnown RBP eCLIP12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ST3GAL2Q16842 350 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 STPG1Q5TH74 334 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OTPQ5XKR4 325 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CARD17Q5XLA6 110 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SFRP4Q6FHJ7 346 aaPredicted RBP12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 UTS2BQ765I0 119 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TIPARPQ7Z3E1 657 aaKnown RBP12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OR8B12Q8NGG6 310 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OR2V1Q8NHB1 315 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 KCNG3Q8TAE7 436 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OR51E1Q8TCB6 317 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CPT1CQ8TCG5 803 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 AQP3Q92482 292 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 PPP1R14AQ96A00 147 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 NABP1Q96AH0 204 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SFXN2Q96NB2 322 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 FAM173AQ9BQD7 235 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 NPDC1Q9NQX5 325 aaPredicted RBP12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ATPIF1Q9UII2 106 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ZNF222Q9UK12 451 aa12.85□□□□□ -0.35
HLA-DPA1-242ENST00000419277 LRRC3CA6NJW4 275 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 C9orf172C9J069 976 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TNFRSF10AO00220 468 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TNFSF11O14788 317 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ARPC1BO15143 372 aaKnown RBP12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SMAD9O15198 467 aaKnown RBP12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 RER1O15258 196 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 FABP7O15540 132 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 RAMP1O60894 148 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 RGS11O94810 467 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CD74P04233 296 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 GSTP1P09211 210 aaKnown RBP12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CST2P09228 141 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ZNF806P0C7X5 589 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TCEA1P23193 301 aaKnown RBP12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CD82P27701 267 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 NUBP1P53384 320 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CARD18P57730 90 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 RAP2BP61225 183 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 PCBD1P61457 104 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 Q0VFX4 171 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 MFAP5Q13361 173 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 RAB35Q15286 201 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 LPAL2Q16609 132 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ABHD17BQ5VST6 288 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 RTL6Q6ICC9 239 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 DRAM2Q6UX65 266 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 GGNQ86UU5 652 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 COMMD2Q86X83 199 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 GCDHQ92947 438 aaPredicted RBP12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TMEM45BQ96B21 275 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SEH1LQ96EE3 360 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ADAT3Q96EY9 351 aaPredicted RBP12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ADGRG7Q96K78 797 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 PRRT1Q99946 306 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ZNF436Q9C0F3 470 aaPredicted RBP12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CNTD2Q9H8S5 307 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms