RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 LIPNQ5VXI9 398 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 LAIR2Q6ISS4 152 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 RFPL4BQ6ZWI9 263 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 KLBQ86Z14 1044 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 FBXL14Q8N1E6 418 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 PAQR4Q8N4S7 273 aaPredicted RBP7.32□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF676Q8N7Q3 588 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 OR52N1Q8NH53 320 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 GATAD2BQ8WXI9 593 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 FBXW5Q969U6 566 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF75AQ96N20 296 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 NR1H4Q96RI1 486 aaPredicted RBP7.32□□□□□ -1.24
TRIM48-201ENST00000417545 JAM3Q9BX67 310 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 PBOV1Q9GZY1 135 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 CLEC4MQ9H2X3 399 aaPredicted RBP7.32□□□□□ -1.24
TRIM48-201ENST00000417545 PLEKHA1Q9HB21 404 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 TBCCD1Q9NVR7 557 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 FKBP14Q9NWM8 211 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 GPR160Q9UJ42 338 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 OR52A1Q9UKL2 312 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 CMAHPQ9Y471 501 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 A0A087WXM4 84 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 TRBV2A0A0J9YWF9 115 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 PNMA8CA0A1B0GUJ8 204 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 A0A1B0GVI7 797 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 TMEM129A0AVI4 362 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 GGT3PA6NGU5 568 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 ACOD1A6NK06 481 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 DEFB108AA8MXU0 73 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 J3QRE1 110 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 TIMM8AO60220 97 aaPredicted RBP7.31□□□□□ -1.24
TRIM48-201ENST00000417545 MTRF1O75570 445 aaKnown RBP7.31□□□□□ -1.24
TRIM48-201ENST00000417545 UBCP0CG48 685 aaKnown RBP7.31□□□□□ -1.24
TRIM48-201ENST00000417545 LIMS3P0CW19 117 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 LIMS4P0CW20 117 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 BMP4P12644 408 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF35P13682 527 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 SELEP16581 610 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 NR4A1P22736 598 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 TUBG1P23258 451 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 SSTR2P30874 369 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 GLRXP35754 106 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 KLF3P57682 345 aaPredicted RBP7.31□□□□□ -1.24
TRIM48-201ENST00000417545 MOGQ16653 247 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 NKPD1Q17RQ9 610 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF773Q6PK81 442 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 PGAP1Q75T13 922 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF101Q8IZC7 436 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 NUP37Q8NFH4 326 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 TSPAN14Q8NG11 270 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 OR8B12Q8NGG6 310 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 SYNPRQ8TBG9 265 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 SLC25A40Q8TBP6 338 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 TSEN15Q8WW01 171 aaKnown RBP7.31□□□□□ -1.24
TRIM48-201ENST00000417545 FCGR1BQ92637 280 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 PELI1Q96FA3 418 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 REEP6Q96HR9 211 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 PSMG3-AS1Q96PY0 264 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 TMUB1Q9BVT8 246 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 REPIN1Q9BWE0 567 aaKnown RBP7.31□□□□□ -1.24
TRIM48-201ENST00000417545 C1QTNF5Q9BXJ0 243 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 CDCA4Q9BXL8 241 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 DUSP21Q9H596 190 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 OPA3Q9H6K4 179 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 ISG20L2Q9H9L3 353 aaKnown RBP7.31□□□□□ -1.24
TRIM48-201ENST00000417545 DYNLRB1Q9NP97 96 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 TUBG2Q9NRH3 451 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 CA10Q9NS85 328 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 PAK1IP1Q9NWT1 392 aaPredicted RBP7.31□□□□□ -1.24
TRIM48-201ENST00000417545 CISD1Q9NZ45 108 aaKnown RBP7.31□□□□□ -1.24
TRIM48-201ENST00000417545 CLEC2DQ9UHP7 191 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 DUSP13Q9UII6 198 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 EDARQ9UNE0 448 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 MYO18BQ8IUG5 2567 aa7.31□□□□□ -1.24
TRIM48-201ENST00000417545 PLSCR5A0PG75 271 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 PRR32B1ATL7 298 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 GPRIN2O60269 458 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 PLAUP00749 431 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 NGFP01138 241 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 RPSAP08865 295 aaKnown RBP7.3□□□□□ -1.24
TRIM48-201ENST00000417545 OCM2P0CE71 109 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 OCMP0CE72 109 aaPredicted RBP7.3□□□□□ -1.24
TRIM48-201ENST00000417545 ATP6V1B1P15313 513 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF12P17014 697 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 PSMB9P28065 219 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 APOBEC3AP31941 199 aaPredicted RBP7.3□□□□□ -1.24
TRIM48-201ENST00000417545 OTX1P32242 354 aaPredicted RBP7.3□□□□□ -1.24
TRIM48-201ENST00000417545 THBS4P35443 961 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 WNT5AP41221 380 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 MAP2K4P45985 399 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 MMP16P51512 607 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 CDH15P55291 814 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 SNRPD2P62316 118 aaKnown RBP7.3□□□□□ -1.24
TRIM48-201ENST00000417545 MVKQ03426 396 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 MFGE8Q08431 387 aaPredicted RBP7.3□□□□□ -1.24
TRIM48-201ENST00000417545 ALKBH1Q13686 389 aaKnown RBP7.3□□□□□ -1.24
TRIM48-201ENST00000417545 SPHARQ15513 63 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 TBCEQ15813 527 aaPredicted RBP7.3□□□□□ -1.24
TRIM48-201ENST00000417545 NEDD8Q15843 81 aa7.3□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF672Q499Z4 452 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms