RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 CCL19Q99731 98 aa10.23□□□□□ -0.77
ATG4B-207ENST00000415107 ZNF649Q9BS31 505 aa10.23□□□□□ -0.77
ATG4B-207ENST00000415107 MRPL37Q9BZE1 423 aaKnown RBP10.23□□□□□ -0.77
ATG4B-207ENST00000415107 GSX2Q9BZM3 304 aa10.23□□□□□ -0.77
ATG4B-207ENST00000415107 RGCCQ9H4X1 137 aa10.23□□□□□ -0.77
ATG4B-207ENST00000415107 CENPMQ9NSP4 180 aa10.23□□□□□ -0.77
ATG4B-207ENST00000415107 SLCO1C1Q9NYB5 712 aa10.23□□□□□ -0.77
ATG4B-207ENST00000415107 GRIP1Q9Y3R0 1128 aa10.23□□□□□ -0.77
ATG4B-207ENST00000415107 LRP12Q9Y561 859 aa10.23□□□□□ -0.77
ATG4B-207ENST00000415107 A0A1B0GWJ7 208 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 A0A1W2PQL4 384 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-207ENST00000415107 PRR32B1ATL7 298 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 XRCC2O43543 280 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 SRSF10O75494 262 aaKnown RBP10.22□□□□□ -0.77
ATG4B-207ENST00000415107 LCKP06239 509 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 ADH4P08319 380 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 CCDC159P0C7I6 412 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 CFL1P23528 166 aaKnown RBP10.22□□□□□ -0.77
ATG4B-207ENST00000415107 DNASE1P24855 282 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 ATP6V1E1P36543 226 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 LIPAP38571 399 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 CX3CR1P49238 355 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 RIDAP52758 137 aaKnown RBP10.22□□□□□ -0.77
ATG4B-207ENST00000415107 KLF3P57682 345 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-207ENST00000415107 SELENOVP59797 346 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 SNRPD2P62316 118 aaKnown RBP10.22□□□□□ -0.77
ATG4B-207ENST00000415107 ACTA2P62736 377 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 ACTG2P63267 376 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 ZNF85Q03923 595 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 TAF13Q15543 124 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 SNCBQ16143 134 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 ZNF829Q3KNS6 432 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-207ENST00000415107 CDONQ4KMG0 1287 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 C6orf52Q5T4I8 152 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 LRRN1Q6UXK5 716 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 PLEKHG7Q6ZR37 379 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 KRT77Q7Z794 578 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-207ENST00000415107 SYS1Q8N2H4 156 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 RFLNBQ8N5W9 214 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 SYNPRQ8TBG9 265 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 MRPL48Q96GC5 212 aaKnown RBP10.22□□□□□ -0.77
ATG4B-207ENST00000415107 OR2J1Q9GZK6 312 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 LIME1Q9H400 295 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 CYSLTR2Q9NS75 346 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 FKBP14Q9NWM8 211 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 FAM206AQ9NX38 181 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 AASSQ9UDR5 926 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 MRM2Q9UI43 246 aaKnown RBP10.22□□□□□ -0.77
ATG4B-207ENST00000415107 GPR160Q9UJ42 338 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 LAMP3Q9UQV4 416 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 POLQO75417 2590 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 AKAP6Q13023 2319 aa10.22□□□□□ -0.77
ATG4B-207ENST00000415107 LRBAP50851 2863 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 ARFGEF3Q5TH69 2177 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 NOTCH2Q04721 2471 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 A0A0U1RQV5 110 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 EFCAB10A6NFE3 127 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 M0R233 179 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 DENRO43583 198 aaKnown RBP10.21□□□□□ -0.77
ATG4B-207ENST00000415107 IGLV3-1P01715 115 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 KRT8P05787 483 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 SELEP16581 610 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 GCH1P30793 250 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 SLC6A9P48067 706 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 HCCSP53701 268 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 ZNF121P58317 390 aaPredicted RBP10.21□□□□□ -0.77
ATG4B-207ENST00000415107 ERVS71-1P61550 626 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 MALLQ13021 153 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 MRPL28Q13084 256 aaKnown RBP10.21□□□□□ -0.77
ATG4B-207ENST00000415107 SMN1Q16637 294 aaKnown RBP10.21□□□□□ -0.77
ATG4B-207ENST00000415107 DEFB113Q30KQ7 82 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 ZMAT1Q5H9K5 638 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 RNLSQ5VYX0 342 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 FDX2Q6P4F2 183 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 VHLLQ6RSH7 139 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 KRT74Q7RTS7 529 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 SSX6Q7RTT6 188 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 ZNF283Q8N7M2 679 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 OR10H4Q8NGA5 316 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 OR52I1Q8NGK6 324 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 HAVCR1Q96D42 359 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 FOXC2Q99958 501 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 REPIN1Q9BWE0 567 aaKnown RBP10.21□□□□□ -0.77
ATG4B-207ENST00000415107 CXXC4Q9H2H0 198 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 MS4A5Q9H3V2 200 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 NKIRAS2Q9NYR9 191 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 NUFIP1Q9UHK0 495 aaKnown RBP10.21□□□□□ -0.77
ATG4B-207ENST00000415107 DIMT1Q9UNQ2 313 aaKnown RBP10.21□□□□□ -0.77
ATG4B-207ENST00000415107 STARD10Q9Y365 291 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 PMF1-BGLAPU3KQ54 211 aa10.21□□□□□ -0.77
ATG4B-207ENST00000415107 METTL15A6NJ78 407 aa10.2□□□□□ -0.78
ATG4B-207ENST00000415107 IQCF6A8MYZ5 107 aa10.2□□□□□ -0.78
ATG4B-207ENST00000415107 FAM20BO75063 409 aa10.2□□□□□ -0.78
ATG4B-207ENST00000415107 LCATP04180 440 aa10.2□□□□□ -0.78
ATG4B-207ENST00000415107 MMP15P51511 669 aa10.2□□□□□ -0.78
ATG4B-207ENST00000415107 PRKXP51817 358 aa10.2□□□□□ -0.78
ATG4B-207ENST00000415107 PSG7Q13046 419 aa10.2□□□□□ -0.78
ATG4B-207ENST00000415107 GALEQ14376 348 aa10.2□□□□□ -0.78
ATG4B-207ENST00000415107 GK2Q14410 553 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms