RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 P2RY10O00398 339 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 CASKO14936 926 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 CLPXO76031 633 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 IGLV3-1P01715 115 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 RAF1P04049 648 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 CLEC2LP0C7M8 214 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 COX5BP10606 129 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 CCL1P22362 96 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 HOXC12P31275 282 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 OPRM1P35372 400 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 SOX6P35712 828 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 ARR3P36575 388 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 SOX2P48431 317 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 TPTEP56180 551 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 PMPCAQ10713 525 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 HNRNPA0Q13151 305 aaKnown RBP5.79□□□□□ -1.48
VPS41-204ENST00000413141 LSAMPQ13449 338 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 P2RY6Q15077 328 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 TSC22D1Q15714 1073 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 GABRA6Q16445 453 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 ZNF404Q494X3 552 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 TMEM244Q5VVB8 128 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 ZNF474Q6S9Z5 364 aaPredicted RBP5.79□□□□□ -1.48
VPS41-204ENST00000413141 BEND4Q6ZU67 534 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 NCCRP1Q6ZVX7 275 aaPredicted RBP5.79□□□□□ -1.48
VPS41-204ENST00000413141 FAM57BQ71RH2 274 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 MDP1Q86V88 176 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 TPRA1Q86W33 373 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 NR2C2APQ86WQ0 139 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 CXorf67Q86X51 503 aaPredicted RBP5.79□□□□□ -1.48
VPS41-204ENST00000413141 ZNF584Q8IVC4 421 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 C17orf78Q8N4C9 275 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 ZNF610Q8N9Z0 462 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 CPEB3Q8NE35 698 aaKnown RBP5.79□□□□□ -1.48
VPS41-204ENST00000413141 OR13C3Q8NGS6 347 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 TBC1D15Q8TC07 691 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 OR51E1Q8TCB6 317 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 ASB5Q8WWX0 329 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 ORAI1Q96D31 301 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 WBP1Q96G27 269 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 PGAM5Q96HS1 289 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 DMRTA2Q96SC8 542 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 NXF2Q9GZY0 626 aaKnown RBP5.79□□□□□ -1.48
VPS41-204ENST00000413141 PIGMQ9H3S5 423 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 B3GNT2Q9NY97 397 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 ZNF319Q9P2F9 582 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 Q9UFV3 132 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 HHLA2Q9UM44 414 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 DHDHQ9UQ10 334 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 A3GALT2U3KPV4 340 aa5.79□□□□□ -1.48
VPS41-204ENST00000413141 USP24Q9UPU5 2620 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 TRAV8-7A0A075B6U6 113 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 LOC100509620A0A075B734 347 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 TRGV8A0A0C4DH27 118 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 A0A0G2JK05 382 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 A0A0U1RQV5 110 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 A0A1B0GTI1 187 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 IQCMA0A1B0GVH7 501 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 A0A1B0GVI7 797 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 CIB4A0PJX0 185 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 EEF1E1-BLOC1S5C9J1V9 151 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 E9PLN8 166 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 ACACBO00763 2458 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 MSTNO14793 375 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 EEF1E1O43324 174 aaKnown RBP5.78□□□□□ -1.48
VPS41-204ENST00000413141 TBX1O43435 398 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 SYT7O43581 403 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 LMX1BO60663 402 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 NCR1O76036 304 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 CD2P06729 351 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 ZNF14P17017 642 aaPredicted RBP5.78□□□□□ -1.48
VPS41-204ENST00000413141 FSTP19883 344 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 RAB3BP20337 219 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 BMP5P22003 454 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 STOMP27105 288 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 APEX1P27695 318 aaKnown RBP5.78□□□□□ -1.48
VPS41-204ENST00000413141 CA7P43166 264 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 ATRXP46100 2492 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 RORCP51449 518 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 CASP6P55212 293 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 CAV3P56539 151 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 OR10A3P58181 314 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 UBE2NP61088 152 aaKnown RBP5.78□□□□□ -1.48
VPS41-204ENST00000413141 RAB1AP62820 205 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 GFOD2Q3B7J2 385 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 SNAI3Q3KNW1 292 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 ASPHD2Q6ICH7 369 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 DOK3Q7L591 496 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 BHLHA15Q7RTS1 189 aaPredicted RBP5.78□□□□□ -1.48
VPS41-204ENST00000413141 MRGPRGQ86SM5 289 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 LUZP2Q86TE4 346 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 LRRTM1Q86UE6 522 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 NAA40Q86UY6 237 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 COMMD2Q86X83 199 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 CCDC36Q8IYA8 594 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 RELL2Q8NC24 303 aaPredicted RBP5.78□□□□□ -1.48
VPS41-204ENST00000413141 OR52H1Q8NGJ2 320 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 MCFD2Q8NI22 146 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 POM121L2Q96KW2 1035 aa5.78□□□□□ -1.48
VPS41-204ENST00000413141 LYZL4Q96KX0 146 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms