RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 THY1P04216 161 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 SHBGP04278 402 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 SERPINE1P05121 402 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 BPGMP07738 259 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 CHRM2P08172 466 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 DBHP09172 617 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 ALDOCP09972 364 aaKnown RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 FAM153BP0C7A2 387 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 MUC1P15941 1255 aaPredicted RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 CD247P20963 164 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 BGNP21810 368 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 PPIBP23284 216 aaKnown RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 AQP1P29972 269 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 GRK5P34947 590 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 RPL4P36578 427 aaKnown RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 AQP2P41181 271 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 RBM34P42696 430 aaKnown RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 GSK3BP49841 420 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 BMXP51813 675 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 POLR2JP52435 117 aaKnown RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 LGALS4P56470 323 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 ABCE1P61221 599 aaKnown RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 RAP1BP61224 184 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 RPL27P61353 136 aaKnown RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 LSM6P62312 80 aaKnown RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 RAP1AP62834 184 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 DGCR2P98153 550 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 HOXA4Q00056 320 aaPredicted RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 PRB3Q04118 309 aaPredicted RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 MZT1Q08AG7 82 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 ECH1Q13011 328 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 MALLQ13021 153 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 KLRD1Q13241 179 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 TOP3AQ13472 1001 aaPredicted RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 AQP6Q13520 282 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 SCARB2Q14108 478 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 GK2Q14410 553 aaPredicted RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 HABP2Q14520 560 aaPredicted RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 LAPTM4AQ15012 233 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 CNN3Q15417 329 aaKnown RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 OR8G1Q15617 311 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 MPPED2Q15777 294 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 WHAMMP3Q1A5X7 153 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 ALG10Q5BKT4 473 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 LRRC10Q5BKY1 277 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 RABL3Q5HYI8 236 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 ENTPD8Q5MY95 495 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 GCNT6Q5T4J0 391 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 PRAMEF6Q5VXH4 476 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 TEX36Q5VZQ5 186 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 CRIP3Q6Q6R5 217 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 COLCA1Q6ZS62 124 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 PGAP1Q75T13 922 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 PIGWQ7Z7B1 504 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 CENPVQ7Z7K6 275 aaPredicted RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 FAM90A1Q86YD7 464 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 PNKDQ8N490 385 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 GCSAMQ8N6F7 178 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 Q8N7P7 452 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 GOLGA6L1Q8N7Z2 621 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 SMYD1Q8NB12 490 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 OR5AU1Q8NGC0 362 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 OR51D1Q8NGF3 324 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 OR5D13Q8NGL4 314 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 OR6T1Q8NGN1 323 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 OR1F12Q8NHA8 337 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 MOSPD2Q8NHP6 518 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 LRRC8CQ8TDW0 803 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 SLC26A7Q8TE54 656 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 ADAMTS16Q8TE57 1224 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 EPS8L3Q8TE67 593 aaKnown RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 WIPF2Q8TF74 440 aaPredicted RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 AENQ8WTP8 325 aaKnown RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 UBLCP1Q8WVY7 318 aaPredicted RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 C17orf50Q8WW18 174 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 SPRYD4Q8WW59 207 aaPredicted RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 LIPHQ8WWY8 451 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 H1FXQ92522 213 aaKnown RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 SLC7A6Q92536 515 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 RORBQ92753 470 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 GTF2H4Q92759 462 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 VPS33AQ96AX1 596 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 SGTBQ96EQ0 304 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 AJUBAQ96IF1 538 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 OR5M11Q96RB7 305 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 CCL13Q99616 98 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 ASCL2Q99929 193 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 WFDC6Q9BQY6 131 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZNF426Q9BUY5 554 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 TXLNGYQ9BZA5 131 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 TMEM38AQ9H6F2 299 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 WDR55Q9H6Y2 383 aaPredicted RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZNF702PQ9H963 129 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 WDR76Q9H967 626 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 RNPEPL1Q9HAU8 725 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 EMC7Q9NPA0 242 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 MEPEQ9NQ76 525 aaPredicted RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 INPP5EQ9NRR6 644 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 C14orf119Q9NWQ9 140 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 C1orf123Q9NWV4 160 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms