RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 SLC16A1P53985 500 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 SUMO3P55854 103 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 CAV3P56539 151 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 LGALS3BPQ08380 585 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 GABRA6Q16445 453 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 DMKNQ6E0U4 476 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 WBP2NLQ6ICG8 309 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 SPATC1Q76KD6 591 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 EGFL6Q8IUX8 553 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 UBE2J2Q8N2K1 259 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 CYB561A3Q8NBI2 242 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 LIPHQ8WWY8 451 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 MRPL48Q96GC5 212 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 FOXN4Q96NZ1 517 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 CNN2Q99439 309 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 TMEM43Q9BTV4 400 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 SMIM30A4D0T7 59 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 ZNF716A6NP11 495 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 E9PI62 339 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 ETV2O00321 342 aaPredicted RBP11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 OGG1O15527 345 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 HPGDSO60760 199 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 SC5DO75845 299 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 NCR1O76036 304 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 MRPL3P09001 348 aaKnown RBP11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 OR2T7P0C7T2 308 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 CLUP10909 449 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 HIST1H1CP16403 213 aaKnown RBP11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 MYL9P24844 172 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 NR4A2P43354 598 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 DIO1P49895 249 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 ACTA2P62736 377 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 ACTG2P63267 376 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 C9orf135Q5VTT2 229 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 ABLIM2Q6H8Q1 611 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 ARL9Q6T311 187 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 PXKQ7Z7A4 578 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 RDH10Q8IZV5 341 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 MS4A15Q8N5U1 240 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 OR52E2Q8NGJ4 325 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 OR2T27Q8NH04 317 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 C4orf36Q96KX1 117 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 SORCS2Q96PQ0 1159 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 NEDD4LQ96PU5 975 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 DDOQ99489 341 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 NMNAT2Q9BZQ4 307 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 C11orf54Q9H0W9 315 aaPredicted RBP11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 C12orf10Q9HB07 376 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 MOV10Q9HCE1 1003 aaKnown RBP11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 IER3IP1Q9Y5U9 82 aa11.02□□□□□ -0.65
CHRNA1-205ENST00000409542 IGKV1D-42A0A075B6H8 117 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 IGKV3D-15A0A087WSY6 115 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 MCIDASD6RGH6 385 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 J3QLW9 94 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 SERPINA3P01011 423 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 TGFAP01135 160 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 UBL4AP11441 157 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 APEHP13798 732 aaKnown RBP11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 ZNF19P17023 458 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 APOBEC3AP31941 199 aaPredicted RBP11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 HTR3AP46098 478 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 PDLIM4P50479 330 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 CCR4P51679 360 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 PRPS1P60891 318 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 HSF2Q03933 536 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 SKP2Q13309 424 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 INSL4Q14641 139 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 SWI5Q1ZZU3 235 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 CR1LQ2VPA4 569 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 CDONQ4KMG0 1287 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 TRIQKQ629K1 86 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 TMPPEQ6ZT21 453 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 OR4K13Q8NH42 304 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 ABHD4Q8TB40 342 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 PGLYRP3Q96LB9 341 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 NRIP3Q9NQ35 241 aa11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 NOSIPQ9Y314 301 aaKnown RBP11.01□□□□□ -0.65
CHRNA1-205ENST00000409542 TRAV1-2A0A0B4J238 106 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 ANKRD61A6NGH8 418 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 ATP6V1G2-DDX39BF2Z307 99 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 IMPA2O14732 288 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 PLA2G10O15496 165 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 ZNF264O43296 627 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 SLC2A2P11168 524 aaPredicted RBP11□□□□□ -0.65
CHRNA1-205ENST00000409542 APEX1P27695 318 aaKnown RBP11□□□□□ -0.65
CHRNA1-205ENST00000409542 GBX2P52951 348 aaPredicted RBP11□□□□□ -0.65
CHRNA1-205ENST00000409542 SLC25A1P53007 311 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 OR12D2P58182 307 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 C3orf33Q6P1S2 294 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 SSX8Q7RTT4 187 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 SLC35F2Q8IXU6 374 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 Q8N402 240 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 NPEPL1Q8NDH3 523 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 SDR9C7Q8NEX9 313 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 APH1AQ96BI3 265 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 FBXO17Q96EF6 278 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 ARL5BQ96KC2 179 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 NDEL1Q9GZM8 345 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 LAT2Q9GZY6 243 aa11□□□□□ -0.65
CHRNA1-205ENST00000409542 HIF3AQ9Y2N7 669 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms