RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 OR3A4PP47883 348 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 NOVA1P51513 510 aaKnown RBP7.46□□□□□ -1.21
SNX13-201ENST00000409076 PDZK1IP1Q13113 114 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 IKZF1Q13422 519 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 TMEM176BQ3YBM2 270 aaPredicted RBP7.46□□□□□ -1.21
SNX13-201ENST00000409076 SLC25A24Q6NUK1 477 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 C5orf24Q7Z6I8 188 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 ADGRG3Q86Y34 549 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 SPAG16Q8N0X2 631 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 SEH1LQ96EE3 360 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 MRPS24Q96EL2 167 aaKnown RBP7.46□□□□□ -1.21
SNX13-201ENST00000409076 MRPL22Q9NWU5 206 aaKnown RBP7.46□□□□□ -1.21
SNX13-201ENST00000409076 GPN3Q9UHW5 284 aaPredicted RBP7.46□□□□□ -1.21
SNX13-201ENST00000409076 DOCK11Q5JSL3 2073 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 ATXN7O15265 892 aaPredicted RBP7.46□□□□□ -1.22
SNX13-201ENST00000409076 TGM6O95932 706 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 AK1P00568 194 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 ZP3P21754 424 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 FCARP24071 287 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 RRADP55042 308 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 INSM1Q01101 510 aaPredicted RBP7.46□□□□□ -1.22
SNX13-201ENST00000409076 ZNF273Q14593 569 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 PHF19Q5T6S3 580 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 FHL5Q5TD97 284 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 ADAM5Q6NVV9 412 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 APCDD1LQ8NCL9 501 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 RNASE11Q8TAA1 199 aaKnown RBP7.46□□□□□ -1.22
SNX13-201ENST00000409076 C14orf79Q96F83 325 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 PGAM5Q96HS1 289 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 UBL7Q96S82 380 aaPredicted RBP7.46□□□□□ -1.22
SNX13-201ENST00000409076 C19orf43Q9BQ61 176 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 GDE1Q9NZC3 331 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 PCDHGA1Q9Y5H4 931 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 ASPMQ8IZT6 3477 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 PRSS37A4D1T9 235 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 ZNF850A8MQ14 1090 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 SGCEO43556 437 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 PGCP20142 388 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 BLVRBP30043 206 aaPredicted RBP7.46□□□□□ -1.22
SNX13-201ENST00000409076 ZNF93P35789 620 aaPredicted RBP7.46□□□□□ -1.22
SNX13-201ENST00000409076 TSFMP43897 325 aaKnown RBP7.46□□□□□ -1.22
SNX13-201ENST00000409076 NPBWR1P48145 328 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 RPS16P62249 146 aaKnown RBP7.46□□□□□ -1.22
SNX13-201ENST00000409076 SMCO1Q147U7 214 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 CLVS2Q5SYC1 327 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 RGS7BPQ6MZT1 257 aaPredicted RBP7.46□□□□□ -1.22
SNX13-201ENST00000409076 OR2AE1Q8NHA4 323 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 SGK3Q96BR1 496 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 LRRC61Q9BV99 259 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 PITHD1Q9GZP4 211 aaPredicted RBP7.46□□□□□ -1.22
SNX13-201ENST00000409076 NXT1Q9UKK6 140 aaKnown RBP7.46□□□□□ -1.22
SNX13-201ENST00000409076 FBXO7Q9Y3I1 522 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 TMEM14AQ9Y6G1 99 aa7.46□□□□□ -1.22
SNX13-201ENST00000409076 A0A1W2PPC1 479 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 MSGN1A6NI15 193 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 STMND1H3BQB6 276 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 ZNF749O43361 778 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 SPRY1O43609 319 aaPredicted RBP7.45□□□□□ -1.22
SNX13-201ENST00000409076 LRP3O75074 770 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 TPPPO94811 219 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 ARG1P05089 322 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 LINC00271P0C7V0 271 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 MST1P26927 711 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 ADH6P28332 368 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 ACSM1Q08AH1 577 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 RASGEF1BQ0VAM2 473 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 ELAVL1Q15717 326 aaKnown RBP7.45□□□□□ -1.22
SNX13-201ENST00000409076 CHRFAM7AQ494W8 412 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 NHLRC3Q5JS37 347 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 OR5H2Q8NGV7 314 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 OTOSQ8NHW6 89 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 ADAT3Q96EY9 351 aaPredicted RBP7.45□□□□□ -1.22
SNX13-201ENST00000409076 AKR1E2Q96JD6 320 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 LCORQ96JN0 433 aaPredicted RBP7.45□□□□□ -1.22
SNX13-201ENST00000409076 FBXL21Q9UKT6 434 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 AMDHD2Q9Y303 409 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 PUS1Q9Y606 427 aaKnown RBP eCLIP7.45□□□□□ -1.22
SNX13-201ENST00000409076 ZNF726A6NNF4 738 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 GUSBP08236 651 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 UBBP0CG47 229 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 UBCP0CG48 685 aaKnown RBP7.45□□□□□ -1.22
SNX13-201ENST00000409076 ZNF14P17017 642 aaPredicted RBP7.45□□□□□ -1.22
SNX13-201ENST00000409076 ZNF16P17020 682 aaPredicted RBP7.45□□□□□ -1.22
SNX13-201ENST00000409076 EPHA1P21709 976 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 PTBP1P26599 531 aaKnown RBP eCLIP7.45□□□□□ -1.223e-8■■■■■ 29.3
SNX13-201ENST00000409076 GPR85P60893 370 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 RPL27P61353 136 aaKnown RBP7.45□□□□□ -1.22
SNX13-201ENST00000409076 SNRPEP62304 92 aaKnown RBP7.45□□□□□ -1.22
SNX13-201ENST00000409076 MFAP5Q13361 173 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 COL19A1Q14993 1142 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 PUSL1Q8N0Z8 303 aaKnown RBP7.45□□□□□ -1.22
SNX13-201ENST00000409076 TMEM217Q8N7C4 229 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 PNPLA2Q96AD5 504 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 ARHGAP5-AS1Q96IT6 56 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 MAGT1Q9H0U3 335 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 LYRM4Q9HD34 91 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 GPR84Q9NQS5 396 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 MRPS28Q9Y2Q9 187 aaKnown RBP7.45□□□□□ -1.22
SNX13-201ENST00000409076 RFNGQ9Y644 331 aa7.45□□□□□ -1.22
SNX13-201ENST00000409076 ABCA1O95477 2261 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms