RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 ALKBH3Q96Q83 286 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-204ENST00000400337 RNF32Q9H0A6 362 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 A0A0A6YYJ9 748 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 GLAP06280 429 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 UHRF2Q96PU4 802 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 ZPBPQ9BS86 351 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 MED18Q9BUE0 208 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 GHRLQ9UBU3 117 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 PMS2P1A4D2B8 440 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 LRP5LA4QPB2 252 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 EPXP11678 715 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 ZNF117Q03924 483 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 KCNIP4Q6PIL6 250 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 TMPRSS11FQ6ZWK6 438 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 S100A7AQ86SG5 101 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 MMP25Q9NPA2 562 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 CTXN2P0C2S0 81 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 PI3P19957 117 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 RPS23P62266 143 aaKnown RBP16.42■□□□□ 0.22
COL18A1-204ENST00000400337 OR2V1Q8NHB1 315 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 WNT16Q9UBV4 365 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 IGHV1OR21-1A0A087WYE8 117 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 ST8SIA3O43173 380 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 GABRB1P18505 474 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 NKX2-1P43699 371 aaPredicted RBP16.42■□□□□ 0.22
COL18A1-204ENST00000400337 TESK1Q15569 626 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 SOHLH1Q5JUK2 328 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 VN1R4Q7Z5H5 301 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 HMGCLL1Q8TB92 370 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 FLVCR1Q9Y5Y0 555 aa16.42■□□□□ 0.22
COL18A1-204ENST00000400337 LAMB2P55268 1798 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 SERTM1A2A2V5 107 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 ANKRD34BA5PLL1 514 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 HSBP1L1C9JCN9 74 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 TGM6O95932 706 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 LALBAP00709 142 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 DSCR4P56555 118 aaPredicted RBP16.41■□□□□ 0.22
COL18A1-204ENST00000400337 CTF1Q16619 201 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 PRICKLE4Q2TBC4 344 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 SLC35G3Q8N808 338 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 ERVMER34-1Q9H9K5 563 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 ZNF705GA8MUZ8 300 aaPredicted RBP16.41■□□□□ 0.22
COL18A1-204ENST00000400337 INSM1Q01101 510 aaPredicted RBP16.41■□□□□ 0.22
COL18A1-204ENST00000400337 BAK1Q16611 211 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 TCTN1Q2MV58 587 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 ELFN2Q5R3F8 820 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 IL3RAP26951 378 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 PPP1CAP62136 330 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 BATFQ16520 125 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 DEFB108BQ8NET1 73 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 NRTNQ99748 197 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 SAMD10Q9BYL1 202 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 AKIP1Q9NQ31 210 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 CSAG2Q9Y5P2 127 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 IMPA2O14732 288 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 ZNF573Q86YE8 665 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 NOXO1Q8NFA2 376 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 RBPMSQ93062 196 aaKnown RBP16.41■□□□□ 0.22
COL18A1-204ENST00000400337 C3orf49Q96BT1 292 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 TAAR9Q96RI9 348 aa16.41■□□□□ 0.22
COL18A1-204ENST00000400337 IGHV1OR15-9A0A0B4J2B8 117 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 SH2D1BO14796 132 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 WDR1O75083 606 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 CRYAAP02489 173 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 LGALS4P56470 323 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 H2BFWTQ7Z2G1 175 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 AKR7LQ8NHP1 331 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 HPSE2Q8WWQ2 592 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 BOD1Q96IK1 185 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 PLK3Q9H4B4 646 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 FBXO34Q9NWN3 711 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 PCYT1BQ9Y5K3 369 aaPredicted RBP16.4■□□□□ 0.22
COL18A1-204ENST00000400337 DCTDP32321 178 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 HRH1P35367 487 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 CEACAM16Q2WEN9 425 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 TRILQ7L0X0 811 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 SCARB1Q8WTV0 552 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 SLC22A20A6NK97 555 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 PDGFAP04085 211 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 CDK5Q00535 292 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 MYBPHQ13203 477 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 SLC25A26Q70HW3 274 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 OTOSQ8NHW6 89 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 GABRG3Q99928 467 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 PARP12Q9H0J9 701 aaKnown RBP16.4■□□□□ 0.22
COL18A1-204ENST00000400337 TAF9BQ9HBM6 251 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 AGAP14A8MT82 685 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 BHLHE40O14503 412 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 HAAOP46952 286 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 HES1Q14469 280 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 HMGN3Q15651 99 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 OR10G3Q8NGC4 313 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 OR13C8Q8NGS7 320 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 DNAJB12Q9NXW2 375 aaKnown RBP16.4■□□□□ 0.22
COL18A1-204ENST00000400337 GLRA1P23415 457 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 DUSP1P28562 367 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 GLCCI1Q86VQ1 547 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 CRISPLD2Q9H0B8 497 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 SLC23A1Q9UHI7 598 aa16.4■□□□□ 0.22
COL18A1-204ENST00000400337 PPP1R3CQ9UQK1 317 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms