RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ABCD3P28288 659 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 GNALP38405 381 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 CX3CR1P49238 355 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 NPY4RP50391 375 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 RPL27P61353 136 aaKnown RBP12.49□□□□□ -0.41
APOB-202ENST00000399256 ECH1Q13011 328 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 NAA40Q86UY6 237 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 TDHQ8IZJ6 230 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 AVL9Q8NBF6 648 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 OR6S1Q8NH40 331 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 FGGYQ96C11 551 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 TWSG1Q9GZX9 223 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 OR52A1Q9UKL2 312 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 COA3Q9Y2R0 106 aaPredicted RBP12.49□□□□□ -0.41
APOB-202ENST00000399256 RHBDD3Q9Y3P4 386 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 R4GMQ9 66 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 HCRTR2O43614 444 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 SSX5O60225 188 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 S100A6P06703 90 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 PTAFRP25105 342 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 TMEM31Q5JXX7 168 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 PTCRAQ6ISU1 281 aaPredicted RBP12.48□□□□□ -0.41
APOB-202ENST00000399256 DRAM2Q6UX65 266 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 OR52N4Q8NGI2 321 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 OR4K15Q8NH41 348 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 ADAMTS17Q8TE56 1095 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 ADOQ96SZ5 270 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 SEC61A2Q9H9S3 476 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 C1orf196B1AJZ1 125 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 RAB6AP20340 208 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 CD1CP29017 333 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 FUT7Q11130 342 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 EBPQ15125 230 aaKnown RBP12.48□□□□□ -0.41
APOB-202ENST00000399256 TGIF1Q15583 401 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 FOXRED2Q8IWF2 684 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 MRPL38Q96DV4 380 aaKnown RBP12.48□□□□□ -0.41
APOB-202ENST00000399256 BMFQ96LC9 184 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 CDCA3Q99618 268 aaPredicted RBP12.48□□□□□ -0.41
APOB-202ENST00000399256 PLA2G2FQ9BZM2 168 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 S1PR5Q9H228 398 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 PTGES2Q9H7Z7 377 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 G6PC2Q9NQR9 355 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 SMCO4Q9NRQ5 59 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 FREM3P0C091 2139 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 A0A1W2PPE3 182 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 LOC390937A0A1W2PQ73 354 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 CLPSP04118 112 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 SMIM6P0DI80 62 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 CD37P11049 281 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 CPT2P23786 658 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 FCARP24071 287 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 CYCSP99999 105 aaKnown RBP12.48□□□□□ -0.41
APOB-202ENST00000399256 ZNF117Q03924 483 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 RPL7L1Q6DKI1 246 aaKnown RBP12.48□□□□□ -0.41
APOB-202ENST00000399256 KDM8Q8N371 416 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 ZNF519Q8TB69 540 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 PTX4Q96A99 478 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 NICN1Q9BSH3 213 aa12.48□□□□□ -0.41
APOB-202ENST00000399256 NAA11Q9BSU3 229 aaPredicted RBP12.48□□□□□ -0.41
APOB-202ENST00000399256 NXF5Q9H1B4 397 aaKnown RBP12.48□□□□□ -0.41
APOB-202ENST00000399256 SRSF10O75494 262 aaKnown RBP12.47□□□□□ -0.41
APOB-202ENST00000399256 VSIG8P0DPA2 414 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 S100A10P60903 97 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 EIF2S3LQ2VIR3 472 aaKnown RBP12.47□□□□□ -0.41
APOB-202ENST00000399256 FAM76BQ5HYJ3 339 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 PRSS54Q6PEW0 395 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 DCXRQ7Z4W1 244 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 HOGA1Q86XE5 327 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 LYPD6Q86Y78 171 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 TCEAL3Q969E4 200 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 TMEM230Q96A57 120 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 AKR1E2Q96JD6 320 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 SMIM8Q96KF7 97 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 SULT4A1Q9BR01 284 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 ZNF251Q9BRH9 671 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 PDE7BQ9NP56 450 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 RPH3AQ9Y2J0 694 aaPredicted RBP12.47□□□□□ -0.41
APOB-202ENST00000399256 TMEM269A0A1B0GVZ9 245 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 C5orf52A6NGY3 159 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 CLDN4O14493 209 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 ZNF44P15621 663 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 RAB32Q13637 225 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 DHRS11Q6UWP2 260 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 CLEC18BQ6UXF7 455 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 COX15Q7KZN9 410 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 MAMDC2Q7Z304 686 aaPredicted RBP12.47□□□□□ -0.41
APOB-202ENST00000399256 OOSP2Q86WS3 158 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 NKAIN3Q8N8D7 197 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 HIST1H2BAQ96A08 127 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 OR10C1Q96KK4 312 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 IGFLR1Q9H665 355 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 RNF122Q9H9V4 155 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 RPS10P5Q9NQ39 176 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 CENPMQ9NSP4 180 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 GSKIPQ9P0R6 139 aa12.47□□□□□ -0.41
APOB-202ENST00000399256 TRAV36DV7A0A075B6V5 113 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 FBXO24O75426 580 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 CELA2BP08218 269 aaPredicted RBP12.46□□□□□ -0.41
APOB-202ENST00000399256 FOLR2P14207 255 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 TAS2R31P59538 309 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms