RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 DEGS1O15121 323 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 CD3DP04234 171 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 IGHV4-34P06331 123 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 GSTP1P09211 210 aaKnown RBP12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 MC2RQ01718 297 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 ARSJQ5FYB0 599 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 TMEM200AQ86VY9 491 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 PP6455Q8WZ26 134 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 TMEM68Q96MH6 324 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 SCN3AQ9NY46 2000 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 A0A1B0GUH1 482 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 C4orf47A7E2U8 309 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 LALBAP00709 142 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 B4GALT1P15291 398 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 ZFP36L2P47974 494 aaKnown RBP12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 IDH3GP51553 393 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 CEACAM16Q2WEN9 425 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 PHLDA2Q53GA4 152 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 COMTD1Q86VU5 262 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 MFSD4AQ8N468 514 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 ROBO4Q8WZ75 1007 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 MOGAT1Q96PD6 335 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 PRMT8Q9NR22 394 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 FLRT3Q9NZU0 649 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 EXO1Q9UQ84 846 aaKnown RBP12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 MYO16Q9Y6X6 1858 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 SNRPGP15A8MWD9 76 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 CRYZL1O95825 349 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 SELEP16581 610 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 RFC3P40938 356 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 KIR2DL3P43628 341 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 WDR38Q5JTN6 314 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 RNLSQ5VYX0 342 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 RHOUQ7L0Q8 258 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 BTLAQ7Z6A9 289 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 ARHGEF39Q8N4T4 335 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 REEP6Q96HR9 211 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 CRLF2Q9HC73 371 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 ZFC3H1O60293 1989 aaKnown RBP12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 A0A096LPE4 126 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 A0A0A6YYJ9 748 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 A0A1W2PPZ6 126 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 ANKRD33BA6NCL7 494 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 GRPP07492 148 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 DCTDP32321 178 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 LTC4SQ16873 150 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 SLC25A30Q5SVS4 291 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 DPPA2Q7Z7J5 298 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 C1orf210Q8IVY1 113 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 GNRHR2Q96P88 292 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 TSPAN32Q96QS1 320 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 COQ3Q9NZJ6 369 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 PCDHB10Q9UN67 800 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 CASP8AP2Q9UKL3 1982 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 RGPD3A6NKT7 1758 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 A0A1W2PQD3 144 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 C5orf49A4QMS7 147 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 KRBOX1C9JBD0 128 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 RAB6AP20340 208 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 PLGLAQ15195 96 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 TAF9Q16594 264 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 CDONQ4KMG0 1287 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 ALKBH3Q96Q83 286 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 FAM173AQ9BQD7 235 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 SDHAF2Q9NX18 166 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 BRCA1P38398 1863 aaKnown RBP12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 LRP5LA4QPB2 252 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 MPPED1O15442 326 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 GLSO94925 669 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 CDAP32320 146 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 RAD52P43351 418 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 GZMKP49863 264 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 FMODQ06828 376 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 C16orf47Q6ZP98 133 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 OR4D6Q8NGJ1 314 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 OR14K1Q8NGZ2 314 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 RNF141Q8WVD5 230 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 GSX2Q9BZM3 304 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 KLK11Q9UBX7 282 aa12.79□□□□□ -0.36
PCDHGA11-201ENST00000398587 RRP8O43159 456 aaKnown RBP12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 OMGP23515 440 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 CD226Q15762 336 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 OR10R2Q8NGX6 335 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 C1orf196B1AJZ1 125 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 WIPI1Q5MNZ9 446 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 FAAP20Q6NZ36 180 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 PRSS42Q7Z5A4 293 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 FOXB1Q99853 325 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 CLEC1BQ9P126 229 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 SLCO1B1Q9Y6L6 691 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 BHLHE40O14503 412 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 SNAPINO95295 136 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 MT-CO3P00414 261 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 TGM1P22735 817 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 THBS4P35443 961 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 HBG1P69891 147 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 HBG2P69892 147 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 DUSP2Q05923 314 aa12.78□□□□□ -0.36
PCDHGA11-201ENST00000398587 SLAMF9Q96A28 289 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms