RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 OR51A2Q8NGJ7 313 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ZFAND2BQ8WV99 257 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 RAXQ9Y2V3 346 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 C5orf51A6NDU8 294 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 NAP1L6A6NFF2 107 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 INMT-MINDY4F8WBC2 141 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 GPX5O75715 221 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 AMY2AP04746 511 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 SOX18P35713 384 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 RBMXP38159 391 aaKnown RBP7.34□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF468Q5VIY5 522 aaPredicted RBP7.34□□□□□ -1.23
PTPRD-204ENST00000397606 LHFPL2Q6ZUX7 228 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 BHLHA15Q7RTS1 189 aaPredicted RBP7.34□□□□□ -1.23
PTPRD-204ENST00000397606 SPERTQ8NA61 448 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 APH1BQ8WW43 257 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 RAB3CQ96E17 227 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 CMSS1Q9BQ75 279 aaKnown RBP7.34□□□□□ -1.23
PTPRD-204ENST00000397606 LIN7BQ9HAP6 207 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 FLVCR1Q9Y5Y0 555 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 APC2O95996 2303 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 A0A1W2PNV4 684 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 A6NIN4 97 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF736B4DX44 427 aaPredicted RBP7.34□□□□□ -1.23
PTPRD-204ENST00000397606 GPANK1O95872 356 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 CHRM2P08172 466 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF16P17020 682 aaPredicted RBP7.34□□□□□ -1.23
PTPRD-204ENST00000397606 CDONQ4KMG0 1287 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 HACD4Q5VWC8 232 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 DBX2Q6ZNG2 339 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 DCDC5Q6ZRR9 648 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 TSEN54Q7Z6J9 526 aaKnown RBP7.34□□□□□ -1.23
PTPRD-204ENST00000397606 ZDHHC23Q8IYP9 409 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 C4orf45Q96LM5 186 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 SLC6A7Q99884 636 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 CACNG6Q9BXT2 260 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF552Q9H707 407 aaPredicted RBP7.34□□□□□ -1.23
PTPRD-204ENST00000397606 METTL8Q9H825 291 aaKnown RBP7.34□□□□□ -1.23
PTPRD-204ENST00000397606 MSRB2Q9Y3D2 182 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 NEUROG3Q9Y4Z2 214 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 MYLKQ15746 1914 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 TMEM127O75204 238 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 MPZL1O95297 269 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 RAB3DO95716 219 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 RAC2P15153 192 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 APEX1P27695 318 aaKnown RBP7.34□□□□□ -1.23
PTPRD-204ENST00000397606 BLVRBP30043 206 aaPredicted RBP7.34□□□□□ -1.23
PTPRD-204ENST00000397606 VEGFCP49767 419 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 TBC1D15Q8TC07 691 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 VRK1Q99986 396 aaPredicted RBP7.34□□□□□ -1.23
PTPRD-204ENST00000397606 ST6GALNAC5Q9BVH7 336 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 ESRP2Q9H6T0 727 aaKnown RBP7.34□□□□□ -1.23
PTPRD-204ENST00000397606 SPACA1Q9HBV2 294 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 TMEM38BQ9NVV0 291 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF69Q9UC07 566 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 MRPS18CQ9Y3D5 142 aaKnown RBP7.34□□□□□ -1.23
PTPRD-204ENST00000397606 PMF1-BGLAPU3KQ54 211 aa7.34□□□□□ -1.23
PTPRD-204ENST00000397606 IGKV1D-42A0A075B6H8 117 aa7.34□□□□□ -1.24
PTPRD-204ENST00000397606 CALCBP10092 127 aa7.34□□□□□ -1.24
PTPRD-204ENST00000397606 THBS4P35443 961 aa7.34□□□□□ -1.24
PTPRD-204ENST00000397606 FABP5Q01469 135 aa7.34□□□□□ -1.24
PTPRD-204ENST00000397606 RTP5Q14D33 572 aa7.34□□□□□ -1.24
PTPRD-204ENST00000397606 P2RY6Q15077 328 aa7.34□□□□□ -1.24
PTPRD-204ENST00000397606 LSRQ86X29 649 aaPredicted RBP7.34□□□□□ -1.24
PTPRD-204ENST00000397606 OR6K3Q8NGY3 331 aa7.34□□□□□ -1.24
PTPRD-204ENST00000397606 SLC25A46Q96AG3 418 aa7.34□□□□□ -1.24
PTPRD-204ENST00000397606 HAVCR1Q96D42 359 aa7.34□□□□□ -1.24
PTPRD-204ENST00000397606 SYT3Q9BQG1 590 aa7.34□□□□□ -1.24
PTPRD-204ENST00000397606 THAP7Q9BT49 309 aaPredicted RBP7.34□□□□□ -1.24
PTPRD-204ENST00000397606 CGGBP1Q9UFW8 167 aaPredicted RBP7.34□□□□□ -1.24
PTPRD-204ENST00000397606 TP53TG5Q9Y2B4 290 aa7.34□□□□□ -1.24
PTPRD-204ENST00000397606 TMEM229AB2RXF0 380 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 HPNP05981 417 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 RPS19P39019 145 aaKnown RBP7.33□□□□□ -1.24
PTPRD-204ENST00000397606 FXYD6P3P58550 94 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 PMPCAQ10713 525 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 MEF2DQ14814 521 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 PLEKHN1Q494U1 663 aaPredicted RBP7.33□□□□□ -1.24
PTPRD-204ENST00000397606 TSPO2Q5TGU0 170 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 C1orf87Q8N0U7 546 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 FADS6Q8N9I5 356 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 HPS1Q92902 700 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 TIMD4Q96H15 378 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 UBL7Q96S82 380 aaPredicted RBP7.33□□□□□ -1.24
PTPRD-204ENST00000397606 SLC5A7Q9GZV3 580 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 ZNF221Q9UK13 617 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 OSGIN2Q9Y236 505 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 CHST2Q9Y4C5 530 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 A0A1W2PR80 420 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 NKX6-3A6NJ46 265 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 H7C1Q1 480 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 PLPP2O43688 288 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 CLEC2LP0C7M8 214 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 RFPL3SP0C7P2 107 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 GALP22466 123 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 NR4A2P43354 598 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 CRYBA2P53672 197 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 OR8B8Q15620 311 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 PCK2Q16822 640 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 WDR38Q5JTN6 314 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 Q6ZTK2 550 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms