RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TIMM50Q3ZCQ8 353 aa18.42■□□□□ 0.54
CPNE1-204ENST00000397443 DPPA2Q7Z7J5 298 aa18.42■□□□□ 0.54
CPNE1-204ENST00000397443 COMMD2Q86X83 199 aa18.42■□□□□ 0.54
CPNE1-204ENST00000397443 CCDC36Q8IYA8 594 aa18.42■□□□□ 0.54
CPNE1-204ENST00000397443 OR8B12Q8NGG6 310 aa18.42■□□□□ 0.54
CPNE1-204ENST00000397443 ZNF420Q8TAQ5 688 aaPredicted RBP18.42■□□□□ 0.54
CPNE1-204ENST00000397443 ABHD4Q8TB40 342 aa18.42■□□□□ 0.54
CPNE1-204ENST00000397443 RPS4Y2Q8TD47 263 aa18.42■□□□□ 0.54
CPNE1-204ENST00000397443 ZNF319Q9P2F9 582 aa18.42■□□□□ 0.54
CPNE1-204ENST00000397443 NKX2-6A6NCS4 301 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 RGS9O75916 674 aaPredicted RBP18.41■□□□□ 0.54
CPNE1-204ENST00000397443 LCATP04180 440 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 HLA-DPB1P04440 258 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 ACSM4P0C7M7 580 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 OTX1P32242 354 aaPredicted RBP18.41■□□□□ 0.54
CPNE1-204ENST00000397443 APLNRP35414 380 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 FAM27D1Q5T7N8 215 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 C17orf78Q8N4C9 275 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 OR14A2Q96R54 314 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 RALYQ9UKM9 306 aaKnown RBP18.41■□□□□ 0.54
CPNE1-204ENST00000397443 KMT2BQ9UMN6 2715 aaPredicted RBP18.41■□□□□ 0.54
CPNE1-204ENST00000397443 ARPC4-TTLL3A0A0A6YYG9 625 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 A0A1B0GUH1 482 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 TTRP02766 147 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 CCKARP32238 428 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 SOX2P48431 317 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 CCR9P51686 369 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 RPS11P62280 158 aaKnown RBP eCLIP18.41■□□□□ 0.54
CPNE1-204ENST00000397443 CDSNQ15517 529 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 SNAI3Q3KNW1 292 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 ACSM3Q53FZ2 586 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 TMEM91Q6ZNR0 172 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 SLC30A7Q8NEW0 376 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 OR51E1Q8TCB6 317 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 OR51B6Q9H340 312 aa18.41■□□□□ 0.54
CPNE1-204ENST00000397443 TXNL4BQ9NX01 149 aaKnown RBP18.41■□□□□ 0.54
CPNE1-204ENST00000397443 ERRFI1Q9UJM3 462 aaPredicted RBP18.41■□□□□ 0.54
CPNE1-204ENST00000397443 ADGRG4Q8IZF6 3080 aa18.4■□□□□ 0.54
CPNE1-204ENST00000397443 GPRIN2O60269 458 aa18.4■□□□□ 0.54
CPNE1-204ENST00000397443 C1QL1O75973 258 aa18.4■□□□□ 0.54
CPNE1-204ENST00000397443 ATE1O95260 518 aa18.4■□□□□ 0.54
CPNE1-204ENST00000397443 SERPINA5P05154 406 aa18.4■□□□□ 0.54
CPNE1-204ENST00000397443 HOXB1P14653 301 aaPredicted RBP18.4■□□□□ 0.54
CPNE1-204ENST00000397443 UGT2B10P36537 528 aa18.4■□□□□ 0.54
CPNE1-204ENST00000397443 SPCS2Q15005 226 aa18.4■□□□□ 0.54
CPNE1-204ENST00000397443 CEACAM19Q7Z692 300 aa18.4■□□□□ 0.54
CPNE1-204ENST00000397443 ELMOD2Q8IZ81 293 aa18.4■□□□□ 0.54
CPNE1-204ENST00000397443 PAQR4Q8N4S7 273 aaPredicted RBP18.4■□□□□ 0.54
CPNE1-204ENST00000397443 MS4A15Q8N5U1 240 aa18.4■□□□□ 0.54
CPNE1-204ENST00000397443 NDNFQ8TB73 568 aa18.4■□□□□ 0.54
CPNE1-204ENST00000397443 TSEN15Q8WW01 171 aaKnown RBP18.4■□□□□ 0.54
CPNE1-204ENST00000397443 ORAI1Q96D31 301 aa18.4■□□□□ 0.54
CPNE1-204ENST00000397443 ZNF75AQ96N20 296 aa18.4■□□□□ 0.54
CPNE1-204ENST00000397443 ELOVL5Q9NYP7 299 aa18.4■□□□□ 0.54
CPNE1-204ENST00000397443 NUFIP1Q9UHK0 495 aaKnown RBP18.4■□□□□ 0.54
CPNE1-204ENST00000397443 CHD6Q8TD26 2715 aa18.4■□□□□ 0.54
CPNE1-204ENST00000397443 SPTBN1Q01082 2364 aaKnown RBP18.39■□□□□ 0.54
CPNE1-204ENST00000397443 LOC107986453A0A1B0GWG9 222 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 ACOD1A6NK06 481 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 C16orf97H3BN30 126 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 ZNF14P17017 642 aaPredicted RBP18.39■□□□□ 0.53
CPNE1-204ENST00000397443 TAB1Q15750 504 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 DRAM2Q6UX65 266 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 C22orf34Q6ZV56 151 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 PRSS45Q7RTY3 260 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 CA5BP1Q8WTZ4 195 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 ZC3HAV1LQ96H79 300 aaKnown RBP18.39■□□□□ 0.53
CPNE1-204ENST00000397443 POM121L2Q96KW2 1035 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 TRDV1A0A1B0GX56 115 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 APOC1P02654 83 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 OCM2P0CE71 109 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 CD53P19397 219 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 SNTB1Q13884 538 aaKnown RBP18.39■□□□□ 0.53
CPNE1-204ENST00000397443 KRTAP27-1Q3LI81 207 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 YIF1BQ5BJH7 314 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 TIMM23BQ5SRD1 257 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 STEAP2Q8NFT2 490 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 OR2AE1Q8NHA4 323 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 MUCL1Q96DR8 90 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 BOD1Q96IK1 185 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 SOX7Q9BT81 388 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 DCUN1D5Q9BTE7 237 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 MOB1AQ9H8S9 216 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 AMDHD2Q9Y303 409 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 SLC25A15Q9Y619 301 aa18.39■□□□□ 0.53
CPNE1-204ENST00000397443 CD1AP06126 327 aa18.38■□□□□ 0.53
CPNE1-204ENST00000397443 CBR1P16152 277 aa18.38■□□□□ 0.53
CPNE1-204ENST00000397443 ZNF83P51522 516 aa18.38■□□□□ 0.53
CPNE1-204ENST00000397443 PRSS12P56730 875 aa18.38■□□□□ 0.53
CPNE1-204ENST00000397443 TRAM1Q15629 374 aa18.38■□□□□ 0.53
CPNE1-204ENST00000397443 CD200R1LQ6Q8B3 271 aa18.38■□□□□ 0.53
CPNE1-204ENST00000397443 ZNF704Q6ZNC4 412 aaPredicted RBP18.38■□□□□ 0.53
CPNE1-204ENST00000397443 PPIL3Q9H2H8 161 aaKnown RBP18.38■□□□□ 0.53
CPNE1-204ENST00000397443 ATPIF1Q9UII2 106 aa18.38■□□□□ 0.53
CPNE1-204ENST00000397443 A0A1W2PPW3 197 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 PYCARD-AS1I3L0S3 204 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 UBCP0CG48 685 aaKnown RBP18.37■□□□□ 0.53
CPNE1-204ENST00000397443 COX5BP10606 129 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 ASCL1P50553 236 aa18.37■□□□□ 0.53
CPNE1-204ENST00000397443 PPA1Q15181 289 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms