RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 NR0B1P51843 470 aaKnown RBP12.39□□□□□ -0.43
NUP98-204ENST00000397004 SCRN3Q0VDG4 424 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 CCINQ13939 588 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 PCK2Q16822 640 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 C1orf140Q5VVS0 124 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 CMSS1Q9BQ75 279 aaKnown RBP12.39□□□□□ -0.43
NUP98-204ENST00000397004 SLCO5A1Q9H2Y9 848 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 ZNF319Q9P2F9 582 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 DHCR7Q9UBM7 475 aaKnown RBP12.39□□□□□ -0.43
NUP98-204ENST00000397004 CEP290O15078 2479 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 TMEM269A0A1B0GVZ9 245 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 BCKDHBP21953 392 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 MICBQ29980 383 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 MAMDC2Q7Z304 686 aaPredicted RBP12.39□□□□□ -0.43
NUP98-204ENST00000397004 SLC30A7Q8NEW0 376 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 STOML3Q8TAV4 291 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 NKX2-4Q9H2Z4 354 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 CKLFQ9UBR5 152 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 ATXN7L1Q9ULK2 861 aaPredicted RBP12.39□□□□□ -0.43
NUP98-204ENST00000397004 TEX13DA0A0J9YY54 714 aaPredicted RBP12.38□□□□□ -0.43
NUP98-204ENST00000397004 RAB19A4D1S5 217 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 KCNJ3P48549 501 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 PHF19Q5T6S3 580 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 OR51F2Q8NH61 342 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 TCRBV21S2A2A0A5A6 115 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 C5orf63A6NC05 138 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 DUS4LO95620 317 aaKnown RBP12.38□□□□□ -0.43
NUP98-204ENST00000397004 ZNF17P17021 662 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 PSMB6P28072 239 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 AKT2P31751 481 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 ID4P47928 161 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 DNASE1L1P49184 302 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 SMAD2Q15796 467 aaKnown RBP12.38□□□□□ -0.43
NUP98-204ENST00000397004 DHRS7BQ6IAN0 325 aaPredicted RBP12.38□□□□□ -0.43
NUP98-204ENST00000397004 HOGA1Q86XE5 327 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 CHST4Q8NCG5 386 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 C2CD4CQ8TF44 421 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 OR10C1Q96KK4 312 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 CHMP1AQ9HD42 196 aaPredicted RBP12.38□□□□□ -0.43
NUP98-204ENST00000397004 SLC2A4RGQ9NR83 387 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 GPR27Q9NS67 375 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 ZNF107Q9UII5 783 aaPredicted RBP12.38□□□□□ -0.43
NUP98-204ENST00000397004 SHISA8B8ZZ34 492 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 ALG1L2C9J202 215 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 SOCS1O15524 211 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 CD2P06729 351 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 ABCD3P28288 659 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 TMEM50BP56557 158 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 BIKQ13323 160 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 KCTD18Q6PI47 426 aaPredicted RBP12.38□□□□□ -0.43
NUP98-204ENST00000397004 CRIP3Q6Q6R5 217 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 OR4K17Q8NGC6 315 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 PTX4Q96A99 478 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 SLC46A1Q96NT5 459 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 COMMD9Q9P000 198 aa12.38□□□□□ -0.43
NUP98-204ENST00000397004 PMS2P1A4D2B8 440 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 E9PLN8 166 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 IGHMP01871 453 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 SPEM2Q0P670 501 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 ANKRD55Q3KP44 614 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 RAB12Q6IQ22 244 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 UQCC3Q6UW78 93 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 SLC29A4Q7RTT9 530 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 PRSS58Q8IYP2 241 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 ZFP82Q8N141 532 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 ZDHHC22Q8N966 263 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 FOXRED1Q96CU9 486 aaPredicted RBP12.37□□□□□ -0.43
NUP98-204ENST00000397004 PRRT1Q99946 306 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 USB1Q9BQ65 265 aaKnown RBP12.37□□□□□ -0.43
NUP98-204ENST00000397004 EMC6Q9BV81 110 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 CARHSP1Q9Y2V2 147 aaKnown RBP12.37□□□□□ -0.43
NUP98-204ENST00000397004 SEMA4FO95754 770 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 SPP1P10451 314 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.37□□□□□ -0.43
NUP98-204ENST00000397004 ZNF529Q6P280 563 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 DCUN1D4Q92564 292 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 PHB2Q99623 299 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 SLC7A5P2Q9GIP4 190 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 ZNF629Q9UEG4 869 aaPredicted RBP12.37□□□□□ -0.43
NUP98-204ENST00000397004 NDRG3Q9UGV2 375 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 THEGLP0DJG4 465 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 RAB6AP20340 208 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 EIF1AXP47813 144 aaKnown RBP12.37□□□□□ -0.43
NUP98-204ENST00000397004 GLO1Q04760 184 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 H3F3CQ6NXT2 135 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 PNLDC1Q8NA58 520 aaKnown RBP12.37□□□□□ -0.43
NUP98-204ENST00000397004 TCTN2Q96GX1 697 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 CDCA3Q99618 268 aaPredicted RBP12.37□□□□□ -0.43
NUP98-204ENST00000397004 LPAR5Q9H1C0 372 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 FBXO9Q9UK97 447 aaPredicted RBP12.37□□□□□ -0.43
NUP98-204ENST00000397004 HS3ST3A1Q9Y663 406 aa12.37□□□□□ -0.43
NUP98-204ENST00000397004 GALNSP34059 522 aa12.36□□□□□ -0.43
NUP98-204ENST00000397004 NPY4RP50391 375 aa12.36□□□□□ -0.43
NUP98-204ENST00000397004 MFAP5Q13361 173 aa12.36□□□□□ -0.43
NUP98-204ENST00000397004 COL13A1Q5TAT6 717 aaPredicted RBP12.36□□□□□ -0.43
NUP98-204ENST00000397004 ARMC6Q6NXE6 501 aa12.36□□□□□ -0.43
NUP98-204ENST00000397004 DRAM2Q6UX65 266 aa12.36□□□□□ -0.43
NUP98-204ENST00000397004 TTLL10Q6ZVT0 673 aa12.36□□□□□ -0.43
NUP98-204ENST00000397004 ARMC10Q8N2F6 343 aa12.36□□□□□ -0.43
NUP98-204ENST00000397004 GTPBP8Q8N3Z3 284 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms