RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 COPS4Q9BT78 406 aa14.16□□□□□ -0.14
CXCL1-201ENST00000395761 YTHDF1Q9BYJ9 559 aaKnown RBP14.16□□□□□ -0.14
CXCL1-201ENST00000395761 TPK1Q9H3S4 243 aa14.16□□□□□ -0.14
CXCL1-201ENST00000395761 BARX1Q9HBU1 254 aaPredicted RBP14.16□□□□□ -0.14
CXCL1-201ENST00000395761 RPL36Q9Y3U8 105 aaKnown RBP14.16□□□□□ -0.14
CXCL1-201ENST00000395761 C5orf63A6NC05 138 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 TRIM64A6NGJ6 449 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 TRIM64BA6NI03 449 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 CCDC159P0C7I6 412 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 SLC15A1P46059 708 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 RGS6P49758 472 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 PRKXP51817 358 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 NUDT6P53370 316 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 TPTEP56180 551 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 PSG7Q13046 419 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 TAF13Q15543 124 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 SMN1Q16637 294 aaKnown RBP14.15□□□□□ -0.14
CXCL1-201ENST00000395761 NKPD1Q17RQ9 610 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 CLEC12BQ2HXU8 276 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 LCN1P1Q5VSP4 162 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 COLCA1Q6ZS62 124 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 SLC16A9Q7RTY1 509 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 THEM6Q8WUY1 208 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 RNF133Q8WVZ7 376 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 SPTSSAQ969W0 71 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 C1QTNF5Q9BXJ0 243 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 RAB1BQ9H0U4 201 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 SLCO1C1Q9NYB5 712 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 PTTG3PQ9NZH4 202 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 FBXO9Q9UK97 447 aaPredicted RBP14.15□□□□□ -0.14
CXCL1-201ENST00000395761 LRCH1Q9Y2L9 728 aa14.15□□□□□ -0.14
CXCL1-201ENST00000395761 M0R135 149 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 LCATP04180 440 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 TUBG1P23258 451 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 OTX1P32242 354 aaPredicted RBP14.14□□□□□ -0.15
CXCL1-201ENST00000395761 OPRL1P41146 370 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 MTNR1AP48039 350 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 POU4F2Q12837 409 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 RBM48Q5RL73 367 aaKnown RBP14.14□□□□□ -0.15
CXCL1-201ENST00000395761 DNM1P46Q6ZS02 220 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 ZNF525Q8N782 197 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 ZNF454Q8N9F8 522 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 ZNF799Q96GE5 643 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 KCNJ15Q99712 375 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 YIPF3Q9GZM5 350 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 MS4A5Q9H3V2 200 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 ADGRL4Q9HBW9 690 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 TUBG2Q9NRH3 451 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 EXOGQ9Y2C4 368 aaKnown RBP14.14□□□□□ -0.15
CXCL1-201ENST00000395761 PCDHGB5Q9Y5G0 923 aa14.14□□□□□ -0.15
CXCL1-201ENST00000395761 ZNF878C9JN71 531 aa14.13□□□□□ -0.15
CXCL1-201ENST00000395761 H3BSA7 217 aa14.13□□□□□ -0.15
CXCL1-201ENST00000395761 LYNP07948 512 aa14.13□□□□□ -0.15
CXCL1-201ENST00000395761 SLC2A1P11166 492 aa14.13□□□□□ -0.15
CXCL1-201ENST00000395761 DBTP11182 482 aaKnown RBP14.13□□□□□ -0.15
CXCL1-201ENST00000395761 ALOX5APP20292 161 aa14.13□□□□□ -0.15
CXCL1-201ENST00000395761 SLC6A9P48067 706 aa14.13□□□□□ -0.15
CXCL1-201ENST00000395761 PRSS12P56730 875 aa14.13□□□□□ -0.15
CXCL1-201ENST00000395761 ZNF91Q05481 1191 aa14.13□□□□□ -0.15
CXCL1-201ENST00000395761 KLHL22Q53GT1 634 aa14.13□□□□□ -0.15
CXCL1-201ENST00000395761 OR5L1Q8NGL2 311 aa14.13□□□□□ -0.15
CXCL1-201ENST00000395761 HAVCR1Q96D42 359 aa14.13□□□□□ -0.15
CXCL1-201ENST00000395761 CNN2Q99439 309 aaKnown RBP14.13□□□□□ -0.15
CXCL1-201ENST00000395761 TMUB1Q9BVT8 246 aa14.13□□□□□ -0.15
CXCL1-201ENST00000395761 CNOT2Q9NZN8 540 aaKnown RBP14.13□□□□□ -0.15
CXCL1-201ENST00000395761 PSORS1C1Q9UIG5 152 aa14.13□□□□□ -0.15
CXCL1-201ENST00000395761 PURGQ9UJV8 347 aaKnown RBP14.13□□□□□ -0.15
CXCL1-201ENST00000395761 COPS3Q9UNS2 423 aa14.13□□□□□ -0.15
CXCL1-201ENST00000395761 N6AMT1Q9Y5N5 214 aa14.13□□□□□ -0.15
CXCL1-201ENST00000395761 IRGMA1A4Y4 181 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 EFCAB10A6NFE3 127 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 ZSCAN5BA6NJL1 495 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 C17orf100A8MU93 164 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 PRR32B1ATL7 298 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 J3QW42 95 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 SLC1A7O00341 560 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 SBK2P0C263 348 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 PIPP12273 146 aaPredicted RBP14.12□□□□□ -0.15
CXCL1-201ENST00000395761 RAC2P15153 192 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 MAGEB1P43366 347 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 MMP15P51511 669 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 GRB2P62993 217 aaKnown RBP14.12□□□□□ -0.15
CXCL1-201ENST00000395761 RAB40BQ12829 278 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 TNK1Q13470 666 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 MOGQ16653 247 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 SNAI3Q3KNW1 292 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 DRAM2Q6UX65 266 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 FBXW12Q6X9E4 464 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 CIARTQ8N365 385 aaPredicted RBP14.12□□□□□ -0.15
CXCL1-201ENST00000395761 ZNF283Q8N7M2 679 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 BPIFB6Q8NFQ5 453 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 NEU4Q8WWR8 484 aaPredicted RBP14.12□□□□□ -0.15
CXCL1-201ENST00000395761 GGHQ92820 318 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 LGALS12Q96DT0 336 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 RNFT2Q96EX2 444 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 COG8Q96MW5 612 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 MSL2Q9HCI7 577 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 AMBNQ9NP70 447 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 FKBP14Q9NWM8 211 aa14.12□□□□□ -0.15
CXCL1-201ENST00000395761 SCN3BQ9NY72 215 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms