RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 GPN1Q9HCN4 374 aaPredicted RBP14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 GSKIPQ9P0R6 139 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 ZNF736B4DX44 427 aaPredicted RBP14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 C5orf46Q6UWT4 87 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 HOXB13Q92826 284 aaPredicted RBP14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 HGDQ93099 445 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 CCDC120Q96HB5 630 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 SGCZQ96LD1 299 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 MRPS28Q9Y2Q9 187 aaKnown RBP14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 EML6Q6ZMW3 1958 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 EEF1E1-BLOC1S5C9J1V9 151 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 HLA-HP01893 362 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 ALDOBP05062 364 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 RRAS2P62070 204 aaPredicted RBP14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 SRSF6Q13247 344 aaKnown RBP14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 SPATA46Q5T0L3 261 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 IDO2Q6ZQW0 420 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 SLC43A2Q8N370 569 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 FTMTQ8N4E7 242 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 SLC25A43Q8WUT9 341 aaPredicted RBP14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 ADAT3Q96EY9 351 aaPredicted RBP14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 MAP6Q96JE9 813 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 RADILQ96JH8 1075 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 HRASLSQ9HDD0 168 aa14.11□□□□□ -0.15
SMARCD1-202ENST00000394963 TRAV1-2A0A0B4J238 106 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 J3QRE1 110 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 M0R135 149 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 CCSO14618 274 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 NKX2-8O15522 239 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 PMP2P02689 132 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 ANXA3P12429 323 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 MSR1P21757 451 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 MAP2K6P52564 334 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 ACSM1Q08AH1 577 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 LINC00303Q3SY05 128 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 TRAPPC6BQ86SZ2 158 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 TMEM17Q86X19 198 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 ZNF454Q8N9F8 522 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 ASCC1Q8N9N2 400 aaKnown RBP14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 OR4D10Q8NGI6 311 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 ZNF799Q96GE5 643 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 C20orf85Q9H1P6 137 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 GJE1A6NN92 205 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 SGCEO43556 437 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 LIFP15018 202 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 CDC20Q12834 499 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 EXOSC6Q5RKV6 272 aaKnown RBP14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 PPP1R32Q7Z5V6 425 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 BPIFB2Q8N4F0 458 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 CHAC2Q8WUX2 184 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 DEDD2Q8WXF8 326 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 TOMM40LQ969M1 308 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 CCDC187A0A096LP49 1063 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 LOC100289279A0A1B0GTE1 492 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 TNFRSF10AO00220 468 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 GOSR2O14653 212 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 ARPC5O15511 151 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 FXYD4P59646 89 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 BAMBIQ13145 260 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 DEFB109BQ30KR1 87 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 PRR18Q8N4B5 295 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 OR9K2Q8NGE7 335 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 OR5T2Q8NGG2 359 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 HDGFL3Q9Y3E1 203 aa14.1□□□□□ -0.15
SMARCD1-202ENST00000394963 SPRY1O43609 319 aaPredicted RBP14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 EIF1BO60739 113 aaKnown RBP14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 CXCL3P19876 107 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 CCR9P51686 369 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 PPIAP62937 165 aaKnown RBP14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 TNK1Q13470 666 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 TRA2AQ13595 282 aaKnown RBP eCLIP14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 PDSS1Q5T2R2 415 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 STPG1Q5TH74 334 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 OR4D6Q8NGJ1 314 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 OR6F1Q8NGZ6 308 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 SPTSSAQ969W0 71 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 LRFN5Q96NI6 719 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 SIGLEC12Q96PQ1 595 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 BCL2L14Q9BZR8 327 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 CHRNA10Q9GZZ6 450 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 CNTD2Q9H8S5 307 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 TRAPPC4Q9Y296 219 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 RBM7Q9Y580 266 aaKnown RBP14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 TLN1Q9Y490 2541 aaKnown RBP14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 NAGAP17050 411 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 SSPNQ14714 243 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 GJC3Q8NFK1 279 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 GPX7Q96SL4 187 aaPredicted RBP14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 TINAGL1Q9GZM7 467 aaPredicted RBP14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 ANKRD11Q6UB99 2663 aaPredicted RBP14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 CREBL2O60519 120 aaPredicted RBP14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 HRGP04196 525 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 RAB40ALP0C0E4 278 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 DUSP1P28562 367 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 BLVRBP30043 206 aaPredicted RBP14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 RSU1Q15404 277 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 TMEM53Q6P2H8 277 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 HDDC2Q7Z4H3 204 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 OR5AS1Q8N127 324 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms