RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 FBXW9Q5XUX1 488 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 RPUSD3Q6P087 351 aaKnown RBP7.56□□□□□ -1.2
TDP1-203ENST00000393454 ADGRE4PQ86SQ3 457 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 WNT5BQ9H1J7 359 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 OCEL1Q9H607 264 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 C14orf119Q9NWQ9 140 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 ZNF319Q9P2F9 582 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 FOXJ3Q9UPW0 622 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 RTTNQ86VV8 2226 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 A0A1B0GTI1 187 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 A0A1B0GVG6 124 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 OR14I1A6ND48 311 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 TPOP07202 933 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 CD79AP11912 226 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 ANOS1P23352 680 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 UCNP55089 124 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 SPOCK1Q08629 439 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 NRN1LQ496H8 165 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 ACSF3Q4G176 576 aaPredicted RBP7.56□□□□□ -1.2
TDP1-203ENST00000393454 PABPC1L2AQ5JQF8 200 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 SFRP5Q5T4F7 317 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 XKRXQ6PP77 449 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 LRRC28Q86X40 367 aaPredicted RBP7.56□□□□□ -1.2
TDP1-203ENST00000393454 SERPINA12Q8IW75 414 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 C9orf106Q8NAJ2 232 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 OR1J2Q8NGS2 313 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 LGALS14Q8TCE9 139 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 WNT2BQ93097 391 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 GPR137Q96N19 417 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 SOX7Q9BT81 388 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 LIN7BQ9HAP6 207 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 GTF3C1Q12789 2109 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 DMXL2Q8TDJ6 3036 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 IGF2RP11717 2491 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 C5orf63A6NC05 138 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 OR6C6A6NF89 314 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 E9PLN8 166 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 HLA-HP01893 362 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 LCATP04180 440 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 MMP7P09237 267 aaPredicted RBP7.55□□□□□ -1.2
TDP1-203ENST00000393454 MPGP29372 298 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 ID4P47928 161 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 PER3P56645 1201 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 SF3B4Q15427 424 aaKnown RBP eCLIP7.55□□□□□ -1.22e-7■■■■■ 32.9
TDP1-203ENST00000393454 ZNF79Q15937 498 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 GLT8D1Q68CQ7 371 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 OR2A2Q6IF42 318 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 DRAM2Q6UX65 266 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 DOK3Q7L591 496 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 FAM214BQ7L5A3 538 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 PRSS45Q7RTY3 260 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 LYSMD2Q8IV50 215 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 PLPP7Q8NBV4 271 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 OR4M1Q8NGD0 313 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 OR51A2Q8NGJ7 313 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 OR5D14Q8NGL3 314 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 ADAT3Q96EY9 351 aaPredicted RBP7.55□□□□□ -1.2
TDP1-203ENST00000393454 SDHCQ99643 169 aaPredicted RBP7.55□□□□□ -1.2
TDP1-203ENST00000393454 NKX3-1Q99801 234 aaPredicted RBP7.55□□□□□ -1.2
TDP1-203ENST00000393454 WACQ9BTA9 647 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 CCDC32Q9BV29 185 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 SRRQ9GZT4 340 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 OR10A2Q9H208 303 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 PLEKHA1Q9HB21 404 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 SLC17A5Q9NRA2 495 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 SPATA2Q9UM82 520 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 PIEZO2Q9H5I5 2752 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 DOCK7Q96N67 2140 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 FAM87AP0C7U9 286 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 ZNF12P17014 697 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 IGFBP3P17936 291 aaPredicted RBP7.55□□□□□ -1.2
TDP1-203ENST00000393454 FSTP19883 344 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 CCNOP22674 350 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 CRYGSP22914 178 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 OTX1P32242 354 aaPredicted RBP7.55□□□□□ -1.2
TDP1-203ENST00000393454 P2RY14Q15391 338 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 RAB11BQ15907 218 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 HIKESHIQ53FT3 197 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 KRTCAP3Q53RY4 240 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 UBE2NLQ5JXB2 153 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 STEAP3Q658P3 488 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 ASPHD2Q6ICH7 369 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 TMEM53Q6P2H8 277 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 ANKRD16Q6P6B7 361 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 METAP1DQ6UB28 335 aaPredicted RBP7.55□□□□□ -1.2
TDP1-203ENST00000393454 FGD2Q7Z6J4 655 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 CISD2Q8N5K1 135 aaKnown RBP7.55□□□□□ -1.2
TDP1-203ENST00000393454 JAGN1Q8N5M9 183 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 OR1M1Q8NGA1 313 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 OR1K1Q8NGR3 316 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 OR13C9Q8NGT0 318 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 SP140LQ9H930 580 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 CYSLTR2Q9NS75 346 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 CGGBP1Q9UFW8 167 aaPredicted RBP7.55□□□□□ -1.2
TDP1-203ENST00000393454 STEAP1Q9UHE8 339 aa7.55□□□□□ -1.2
TDP1-203ENST00000393454 PTPRQQ9UMZ3 2332 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 CACNA1GO43497 2377 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 MAP1BP46821 2468 aaKnown RBP7.54□□□□□ -1.2
TDP1-203ENST00000393454 PIEZO1Q92508 2521 aa7.54□□□□□ -1.2
TDP1-203ENST00000393454 hCG_2014768A0A024R1R8 64 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms