RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 GABRA6Q16445 453 aa3.41□□□□□ -1.86
RNU6-40P-201ENST00000384254 AVPI1Q5T686 147 aa3.41□□□□□ -1.86
RNU6-40P-201ENST00000384254 MLIPQ5VWP3 458 aa3.41□□□□□ -1.86
RNU6-40P-201ENST00000384254 FBXW9Q5XUX1 488 aa3.41□□□□□ -1.86
RNU6-40P-201ENST00000384254 H3F3CQ6NXT2 135 aa3.41□□□□□ -1.86
RNU6-40P-201ENST00000384254 FAM122BQ7Z309 247 aa3.41□□□□□ -1.86
RNU6-40P-201ENST00000384254 C15orf56Q8N910 161 aa3.41□□□□□ -1.86
RNU6-40P-201ENST00000384254 UBAC2Q8NBM4 344 aa3.41□□□□□ -1.86
RNU6-40P-201ENST00000384254 C15orf40Q8WUR7 153 aa3.41□□□□□ -1.86
RNU6-40P-201ENST00000384254 DEFB129Q9H1M3 183 aa3.41□□□□□ -1.86
RNU6-40P-201ENST00000384254 PATZ1Q9HBE1 687 aaKnown RBP3.41□□□□□ -1.86
RNU6-40P-201ENST00000384254 ZDHHC4Q9NPG8 344 aa3.41□□□□□ -1.86
RNU6-40P-201ENST00000384254 ADA2Q9NZK5 511 aa3.41□□□□□ -1.86
RNU6-40P-201ENST00000384254 IFNKQ9P0W0 207 aa3.41□□□□□ -1.86
RNU6-40P-201ENST00000384254 RHBDD3Q9Y3P4 386 aa3.41□□□□□ -1.86
RNU6-40P-201ENST00000384254 PALLDQ8WX93 1383 aa3.4□□□□□ -1.86
RNU6-40P-201ENST00000384254 TRAV6A0A075B6T7 132 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 CENPXA8MT69 81 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 SCELO95171 688 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 IGKV3-11P04433 115 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 GLAP06280 429 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 CTSLP07711 333 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 PMCHP20382 165 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 SLC11A1P49279 550 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 FABP6P51161 128 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 AP1S2P56377 157 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 STK38Q15208 465 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 RPEL1Q2QD12 228 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 WDR82Q6UXN9 313 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 TRAM1L1Q8N609 369 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 CSGALNACT2Q8N6G5 542 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 TMEM104Q8NE00 496 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 PTX4Q96A99 478 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 ISOC2Q96AB3 205 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 KIAA1143Q96AT1 154 aaPredicted RBP3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 DYNLL2Q96FJ2 89 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 ZNF414Q96IQ9 312 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 BCL7BQ9BQE9 202 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 C12orf10Q9HB07 376 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 TMEM27Q9HBJ8 222 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 RGS18Q9NS28 235 aa3.4□□□□□ -1.87
RNU6-40P-201ENST00000384254 TMEM223A0PJW6 202 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 ANKRD65E5RJM6 399 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 FOXH1O75593 365 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 SLC22A5O76082 557 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 CD37P11049 281 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 GZMAP12544 262 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 GFAPP14136 432 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 TCP1P17987 556 aaKnown RBP3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 GABRR2P28476 465 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 SERPINB8P50452 374 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 TAS2R46P59540 309 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 KRTAP12-2P59991 146 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 FAM83EQ2M2I3 478 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 MRPL21Q7Z2W9 205 aaKnown RBP3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 OR10G6Q8NH81 332 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 HAUS1Q96CS2 278 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 RCN3Q96D15 328 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 SGTBQ96EQ0 304 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 RNF145Q96MT1 663 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 SLIRPQ9GZT3 109 aaKnown RBP3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 CD209Q9NNX6 404 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 ZNF355PQ9NSJ1 428 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 MROH7Q68CQ1 1323 aa3.39□□□□□ -1.87
RNU6-40P-201ENST00000384254 FHOD3Q2V2M9 1422 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 IGLV4-60A0A075B6I1 120 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 IGHV3OR16-9A0A0B4J2B5 98 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 IGHV1-69DA0A0B4J2H0 117 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 ZNF701M0R085 212 aaPredicted RBP3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 DNASE2O00115 360 aaPredicted RBP3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 ZBTB5O15062 677 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 CHST10O43529 356 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 MBP02144 154 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 APCSP02743 223 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 CISD3P0C7P0 127 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 PGA5P0DJD9 388 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 IGFBP3P17936 291 aaPredicted RBP3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 TUBG1P23258 451 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 HTR1DP28221 377 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 PPICP45877 212 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 SYCNQ0VAF6 134 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 SLC39A6Q13433 755 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 STK11Q15831 433 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 ZNF829Q3KNS6 432 aaPredicted RBP3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 TPRG1LQ5T0D9 272 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 C11orf72Q8NBR9 251 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 OR52K1Q8NGK4 314 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 OR8U1Q8NH10 309 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 UBALD1Q8TB05 177 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 FLYWCH2Q96CP2 140 aaKnown RBP3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 ZNF430Q9H8G1 570 aaPredicted RBP3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 TUBG2Q9NRH3 451 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 CHTOPQ9Y3Y2 248 aaKnown RBP3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 YTHDF2Q9Y5A9 579 aaKnown RBP3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 ADGRA3Q8IWK6 1321 aa3.38□□□□□ -1.87
RNU6-40P-201ENST00000384254 IGKV2-28A0A075B6P5 120 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 ARPC4-TTLL3A0A0A6YYG9 625 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 IGHV1OR15-9A0A0B4J2B8 117 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 A0A0J9YXV3 536 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 GOLGA8JA6NMD2 632 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms