RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 KTI12Q96EK9 354 aaPredicted RBP16.99■□□□□ 0.31
CSPG5-202ENST00000383738 IL20Q9NYY1 176 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 SPG11Q96JI7 2443 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 TCF20Q9UGU0 1960 aaKnown RBP16.99■□□□□ 0.31
CSPG5-202ENST00000383738 GPANK1O95872 356 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 DAP3P51398 398 aaKnown RBP16.99■□□□□ 0.31
CSPG5-202ENST00000383738 VAMP2P63027 116 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 S100A12P80511 92 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 DEFB109BQ30KR1 87 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 AAED1Q7RTV5 226 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 OR2W3Q7Z3T1 314 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 GOT1L1Q8NHS2 421 aaPredicted RBP16.99■□□□□ 0.31
CSPG5-202ENST00000383738 ANKRD9Q96BM1 317 aaPredicted RBP16.99■□□□□ 0.31
CSPG5-202ENST00000383738 LHX9Q9NQ69 397 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 BOKQ9UMX3 212 aaPredicted RBP16.99■□□□□ 0.31
CSPG5-202ENST00000383738 NYNRINQ9P2P1 1898 aaKnown RBP16.99■□□□□ 0.31
CSPG5-202ENST00000383738 MRPL33O75394 65 aaKnown RBP16.99■□□□□ 0.31
CSPG5-202ENST00000383738 GABRA1P14867 456 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 CARD18P57730 90 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 TOMM34Q15785 309 aaPredicted RBP16.99■□□□□ 0.31
CSPG5-202ENST00000383738 CHST6Q9GZX3 395 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 MCTS1Q9ULC4 181 aaKnown RBP16.99■□□□□ 0.31
CSPG5-202ENST00000383738 DOCK4Q8N1I0 1966 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 IGHG1P01857 330 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 THBS1P07996 1170 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 UBE2NP61088 152 aaKnown RBP16.99■□□□□ 0.31
CSPG5-202ENST00000383738 EIF2S3LQ2VIR3 472 aaKnown RBP16.99■□□□□ 0.31
CSPG5-202ENST00000383738 OR1N1Q8NGS0 311 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 SNIP1Q8TAD8 396 aaKnown RBP16.99■□□□□ 0.31
CSPG5-202ENST00000383738 ZC3HAV1LQ96H79 300 aaKnown RBP16.99■□□□□ 0.31
CSPG5-202ENST00000383738 SLC41A2Q96JW4 573 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 ISYNA1Q9NPH2 558 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 EMC9Q9Y3B6 208 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 FBXO7Q9Y3I1 522 aa16.99■□□□□ 0.31
CSPG5-202ENST00000383738 TRBV23-1A0A0A0MS06 115 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 ARRDC5A6NEK1 342 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 CRTAPO75718 401 aaPredicted RBP16.98■□□□□ 0.31
CSPG5-202ENST00000383738 EDN3P14138 238 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 ZNF230Q9UIE0 474 aaPredicted RBP16.98■□□□□ 0.31
CSPG5-202ENST00000383738 ANKRD36A6QL64 1941 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 ZFPL1O95159 310 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 MT-CO3P00414 261 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 RAB13P51153 203 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 PSG6Q00889 435 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 HES3Q5TGS1 186 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 VHLLQ6RSH7 139 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 STAC2Q6ZMT1 411 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 FAM57BQ71RH2 274 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 GRINAQ7Z429 371 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 OR5H2Q8NGV7 314 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 P4HTMQ9NXG6 502 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 PCOLCE2Q9UKZ9 415 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 MYO7BQ6PIF6 2116 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 FAM230AA0A1W2PPH8 454 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 NME2P1O60361 137 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 SHISA5Q8N114 240 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 PIEZO1Q92508 2521 aa16.98■□□□□ 0.31
CSPG5-202ENST00000383738 DUSP15Q9H1R2 295 aaPredicted RBP16.98■□□□□ 0.31
CSPG5-202ENST00000383738 ZMAT5Q9UDW3 170 aaKnown RBP16.98■□□□□ 0.31
CSPG5-202ENST00000383738 RALGAPA2Q2PPJ7 1873 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 ZNF850A8MQ14 1090 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 CYR61O00622 381 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 CXCL13O43927 109 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 FOXF1Q12946 379 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 ALKBH1Q13686 389 aaKnown RBP16.97■□□□□ 0.31
CSPG5-202ENST00000383738 C4orf17Q53FE4 359 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 PMS2CLQ68D20 193 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 MRM1Q6IN84 353 aaKnown RBP16.97■□□□□ 0.31
CSPG5-202ENST00000383738 BHLHE23Q8NDY6 225 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 MRPL22Q9NWU5 206 aaKnown RBP16.97■□□□□ 0.31
CSPG5-202ENST00000383738 SNAPC5O75971 98 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 MEOX2P50222 304 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 CD226Q15762 336 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 DCAF12L2Q5VW00 463 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 OR52W1Q6IF63 320 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 MEX3BQ6ZN04 569 aaKnown RBP16.97■□□□□ 0.31
CSPG5-202ENST00000383738 WDR76Q9H967 626 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 PRR13Q9NZ81 148 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 IGHV5-10-1A0A0J9YXX1 117 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 C17orf51A8MQB3 221 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 SDCBPO00560 298 aaPredicted RBP16.97■□□□□ 0.31
CSPG5-202ENST00000383738 HSPA12AO43301 675 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 ATP1B3P54709 279 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 GABREP78334 506 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 GABRG1Q8N1C3 465 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 RFLNBQ8N5W9 214 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 SSX3Q99909 188 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 MENTQ9BUN1 341 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 FN3KRPQ9HA64 309 aa16.97■□□□□ 0.31
CSPG5-202ENST00000383738 DOPEY2Q9Y3R5 2298 aa16.96■□□□□ 0.31
CSPG5-202ENST00000383738 BORCS7-ASMTA0A0B4J1R7 106 aa16.96■□□□□ 0.31
CSPG5-202ENST00000383738 DPM1O60762 260 aa16.96■□□□□ 0.31
CSPG5-202ENST00000383738 HOXD4P09016 255 aaPredicted RBP16.96■□□□□ 0.31
CSPG5-202ENST00000383738 HTR2CP28335 458 aa16.96■□□□□ 0.31
CSPG5-202ENST00000383738 TRIP6Q15654 476 aaKnown RBP16.96■□□□□ 0.31
CSPG5-202ENST00000383738 GPR157Q5UAW9 335 aa16.96■□□□□ 0.31
CSPG5-202ENST00000383738 TMPRSS7Q7RTY8 843 aa16.96■□□□□ 0.31
CSPG5-202ENST00000383738 DCTN6O00399 190 aa16.96■□□□□ 0.31
CSPG5-202ENST00000383738 NFYBP25208 207 aa16.96■□□□□ 0.31
CSPG5-202ENST00000383738 SERPINF1P36955 418 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 231.4 ms