RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 SCGB1D4Q6XE38 83 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 LILRA2Q8N149 483 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 ZNF561Q8N587 486 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 ISG20Q96AZ6 181 aaKnown RBP5.35□□□□□ -1.55
RFX3-204ENST00000382004 OPALINQ96PE5 141 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 CIB3Q96Q77 187 aaPredicted RBP5.35□□□□□ -1.55
RFX3-204ENST00000382004 PRO1933Q9H354 126 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 TXNIPQ9H3M7 391 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 GLIPR2Q9H4G4 154 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 NAT8BQ9UHF3 227 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 RALYQ9UKM9 306 aaKnown RBP5.35□□□□□ -1.55
RFX3-204ENST00000382004 DIMT1Q9UNQ2 313 aaKnown RBP5.35□□□□□ -1.55
RFX3-204ENST00000382004 RCL1Q9Y2P8 373 aaKnown RBP5.35□□□□□ -1.55
RFX3-204ENST00000382004 CHD4Q14839 1912 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 KNTC1P50748 2209 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 LOC107986453A0A1B0GWG9 222 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 CD37P11049 281 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 GCSHP23434 173 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 IQCJQ1A5X6 159 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 Q3ZCU0 254 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 RNF212Q495C1 297 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 SLC35D3Q5M8T2 416 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 PLPPR2Q96GM1 343 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 CDCA3Q99618 268 aaPredicted RBP5.35□□□□□ -1.55
RFX3-204ENST00000382004 TOLLIPQ9H0E2 274 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 FGF21Q9NSA1 209 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 GMPR2Q9P2T1 348 aaKnown RBP5.35□□□□□ -1.55
RFX3-204ENST00000382004 NDRG4Q9ULP0 352 aaKnown RBP5.35□□□□□ -1.55
RFX3-204ENST00000382004 LSM2Q9Y333 95 aaKnown RBP5.35□□□□□ -1.55
RFX3-204ENST00000382004 ADGRB1O14514 1584 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 A0A0A6YYJ9 748 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 ACOT8O14734 319 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 IL2RAP01589 272 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 FAM87AP0C7U9 286 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 HRH1P35367 487 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 GALR1P47211 349 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 SLC6A12P48065 614 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 GNG10P50151 68 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 RPL27P61353 136 aaKnown RBP5.35□□□□□ -1.55
RFX3-204ENST00000382004 IHHQ14623 411 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 ZNF260Q3ZCT1 412 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 B3GNT9Q6UX72 402 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 ZNF66Q6ZN08 573 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 TMEM116Q8NCL8 245 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 TMEM40Q8WWA1 233 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 EDAQ92838 391 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 CSF3RQ99062 836 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 CXorf36Q9H7Y0 433 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 PROCRQ9UNN8 238 aa5.35□□□□□ -1.55
RFX3-204ENST00000382004 F11P03951 625 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 FURINP09958 794 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 ACHEP22303 614 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 ARR3P36575 388 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 SRP14P37108 136 aaKnown RBP5.34□□□□□ -1.55
RFX3-204ENST00000382004 SNRPGP62308 76 aaKnown RBP5.34□□□□□ -1.55
RFX3-204ENST00000382004 PPIAP62937 165 aaKnown RBP5.34□□□□□ -1.55
RFX3-204ENST00000382004 EXT1Q16394 746 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 CLLU1OSQ5K130 101 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 TEX261Q6UWH6 196 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 TMEM147Q9BVK8 224 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 OPRK1P41145 380 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 LSM11P83369 360 aaKnown RBP eCLIP5.34□□□□□ -1.55
RFX3-204ENST00000382004 TMEM267Q0VDI3 215 aaPredicted RBP5.34□□□□□ -1.55
RFX3-204ENST00000382004 C21orf62-AS1Q17RA5 79 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 LYSMD2Q8IV50 215 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 GPX7Q96SL4 187 aaPredicted RBP5.34□□□□□ -1.55
RFX3-204ENST00000382004 RNF2Q99496 336 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 ICAM5Q9UMF0 924 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 TRDV1A0A1B0GX56 115 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 FAM24AA6NFZ4 105 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 J3KRW8 73 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 XRCC2O43543 280 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 HPP00738 406 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 TEAD1P28347 426 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 TGFBR1P36897 503 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 DUS3LQ96G46 650 aaKnown RBP5.34□□□□□ -1.55
RFX3-204ENST00000382004 KLF16Q9BXK1 252 aaPredicted RBP5.34□□□□□ -1.55
RFX3-204ENST00000382004 NDUFB11Q9NX14 153 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 TNFSF11O14788 317 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 B3GALT4O96024 378 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 CRYAAP02489 173 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 PRSS1P07477 247 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 B2MP61769 119 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 PPP2CBP62714 309 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 DMRTC1Q5HYR2 192 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 COL13A1Q5TAT6 717 aaPredicted RBP5.34□□□□□ -1.55
RFX3-204ENST00000382004 SLAMF6Q96DU3 332 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 M0R082 166 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 CTNSO60931 367 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 ACAA2P42765 397 aaKnown RBP5.34□□□□□ -1.55
RFX3-204ENST00000382004 DGCR2P98153 550 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 ZDHHC23Q8IYP9 409 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 OR10D4PQ8NGN7 298 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 ROBO4Q8WZ75 1007 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 ESRP2Q9H6T0 727 aaKnown RBP5.34□□□□□ -1.55
RFX3-204ENST00000382004 A4GALTQ9NPC4 353 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 A0A1W2PNR3 127 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 STAG3L2P0CL84 134 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 ZBTB25P24278 435 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 IVDP26440 423 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms