RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 OR52E2Q8NGJ4 325 aa14.44□□□□□ -0.1
HMGN1-204ENST00000380749 OR11L1Q8NGX0 322 aa14.44□□□□□ -0.1
HMGN1-204ENST00000380749 NSMCE2Q96MF7 247 aa14.44□□□□□ -0.1
HMGN1-204ENST00000380749 DUX5Q96PT3 197 aa14.44□□□□□ -0.1
HMGN1-204ENST00000380749 TMEM165Q9HC07 324 aa14.44□□□□□ -0.1
HMGN1-204ENST00000380749 CYB5R1Q9UHQ9 305 aa14.44□□□□□ -0.1
HMGN1-204ENST00000380749 KCNG2Q9UJ96 466 aa14.44□□□□□ -0.1
HMGN1-204ENST00000380749 NOP16Q9Y3C1 178 aaKnown RBP14.44□□□□□ -0.1
HMGN1-204ENST00000380749 IGHV2-70DA0A0C4DH43 119 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 LCATP04180 440 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 HSD17B1P14061 328 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 RRM2P31350 389 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 CD80P33681 288 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 GATA4P43694 442 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 MTNR1AP48039 350 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 TPTEP56180 551 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 GK2Q14410 553 aaPredicted RBP14.43□□□□□ -0.1
HMGN1-204ENST00000380749 SAMD4BQ5PRF9 694 aaKnown RBP14.43□□□□□ -0.1
HMGN1-204ENST00000380749 ZNF620Q6ZNG0 422 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 BCL6BQ8N143 479 aaPredicted RBP14.43□□□□□ -0.1
HMGN1-204ENST00000380749 CELF2-AS1Q8N7Q2 184 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 OR52L1Q8NGH7 329 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 SPRYD4Q8WW59 207 aaPredicted RBP14.43□□□□□ -0.1
HMGN1-204ENST00000380749 ERGIC1Q969X5 290 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 SLC25A28Q96A46 364 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 TMEM246Q9BRR3 403 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 FAM107BQ9H098 131 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 FN3KQ9H479 309 aa14.43□□□□□ -0.1
HMGN1-204ENST00000380749 TRAV40A0A0B4J280 105 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 A0A1B0GWJ7 208 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 HLA-DPB1P04440 258 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 EGR1P18146 543 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 GSSP48637 474 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 PITPNBP48739 271 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 RAD23AP54725 363 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 PRSS12P56730 875 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 RPL13AP3Q6NVV1 102 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 DCDC5Q6ZRR9 648 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 PGAP1Q75T13 922 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 MRPL21Q7Z2W9 205 aaKnown RBP14.42□□□□□ -0.1
HMGN1-204ENST00000380749 RAB40AQ8WXH6 277 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 SPTSSAQ969W0 71 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 UPRTQ96BW1 309 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 ZNF747Q9BV97 191 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 CLN8Q9UBY8 286 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 PCDHGB1Q9Y5G3 927 aa14.42□□□□□ -0.1
HMGN1-204ENST00000380749 OR6C68A6NDL8 312 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 M0R135 149 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 PHYHO14832 338 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 ARPC2O15144 300 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 RNASE1P07998 156 aaKnown RBP14.41□□□□□ -0.1
HMGN1-204ENST00000380749 IGHV4-38-2P0DP08 117 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 ZNF823P16415 610 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 GGT2P36268 569 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 CD200P41217 278 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 PAX2Q02962 417 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.41□□□□□ -0.1
HMGN1-204ENST00000380749 TSPAN31Q12999 210 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 RSPO1Q2MKA7 263 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-204ENST00000380749 SHISA2Q6UWI4 295 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 C9orf139Q6ZV77 190 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 PGAM4Q8N0Y7 254 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 PROKR2Q8NFJ6 384 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 Q8TCH9 128 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 GNPDA2Q8TDQ7 276 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 SLCO4A1Q96BD0 722 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 ZNF799Q96GE5 643 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 ZNF48Q96MX3 618 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-204ENST00000380749 SLC22A4Q9H015 551 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 PNRC2Q9NPJ4 139 aaKnown RBP14.41□□□□□ -0.1
HMGN1-204ENST00000380749 CDH10Q9Y6N8 788 aa14.41□□□□□ -0.1
HMGN1-204ENST00000380749 IGHV3OR16-10A0A075B7F0 116 aa14.4□□□□□ -0.1
HMGN1-204ENST00000380749 CLDN34H7C241 214 aa14.4□□□□□ -0.1
HMGN1-204ENST00000380749 DBPQ10586 325 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-204ENST00000380749 OR8G1Q15617 311 aa14.4□□□□□ -0.1
HMGN1-204ENST00000380749 CLEC12AQ5QGZ9 265 aa14.4□□□□□ -0.1
HMGN1-204ENST00000380749 FAM201AQ5SY85 155 aa14.4□□□□□ -0.1
HMGN1-204ENST00000380749 SLC35F1Q5T1Q4 408 aa14.4□□□□□ -0.1
HMGN1-204ENST00000380749 OR4C15Q8NGM1 316 aa14.4□□□□□ -0.1
HMGN1-204ENST00000380749 C1orf147Q96MC9 270 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-204ENST00000380749 ADAT1Q9BUB4 502 aaKnown RBP14.4□□□□□ -0.1
HMGN1-204ENST00000380749 IL1RAPQ9NPH3 570 aa14.4□□□□□ -0.1
HMGN1-204ENST00000380749 MRPL22Q9NWU5 206 aaKnown RBP14.4□□□□□ -0.1
HMGN1-204ENST00000380749 SNX3O60493 162 aa14.39□□□□□ -0.11
HMGN1-204ENST00000380749 FAM20BO75063 409 aa14.39□□□□□ -0.11
HMGN1-204ENST00000380749 PLATP00750 562 aa14.39□□□□□ -0.11
HMGN1-204ENST00000380749 PMELP40967 661 aa14.39□□□□□ -0.11
HMGN1-204ENST00000380749 MAB21L1Q13394 359 aa14.39□□□□□ -0.11
HMGN1-204ENST00000380749 KCNJ8Q15842 424 aa14.39□□□□□ -0.11
HMGN1-204ENST00000380749 PRAMEF6Q5VXH4 476 aa14.39□□□□□ -0.11
HMGN1-204ENST00000380749 PGBD2Q6P3X8 592 aa14.39□□□□□ -0.11
HMGN1-204ENST00000380749 ZDHHC21Q8IVQ6 265 aa14.39□□□□□ -0.11
HMGN1-204ENST00000380749 OR2T4Q8NH00 348 aa14.39□□□□□ -0.11
HMGN1-204ENST00000380749 DACT3Q96B18 629 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-204ENST00000380749 MAP6Q96JE9 813 aa14.39□□□□□ -0.11
HMGN1-204ENST00000380749 NUDT16L1Q9BRJ7 211 aaKnown RBP14.39□□□□□ -0.11
HMGN1-204ENST00000380749 MMADHCQ9H3L0 296 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-204ENST00000380749 FN3KRPQ9HA64 309 aa14.39□□□□□ -0.11
HMGN1-204ENST00000380749 UFSP2Q9NUQ7 469 aa14.39□□□□□ -0.11
HMGN1-204ENST00000380749 NDE1Q9NXR1 346 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms