RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 OR2F1Q13607 317 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 EIF2B1Q14232 305 aaKnown RBP11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 RAB11BQ15907 218 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 NKAPLQ5M9Q1 402 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 WBP2NLQ6ICG8 309 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 UNQ9370/PRO34162Q6UXP9 181 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 LMX1AQ8TE12 382 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 NKX2-4Q9H2Z4 354 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 RHOFQ9HBH0 211 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 FBXL21Q9UKT6 434 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 DHDHQ9UQ10 334 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 COA3Q9Y2R0 106 aaPredicted RBP11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 MYO7BQ6PIF6 2116 aa11.18□□□□□ -0.62
PRPF40B-202ENST00000380281 C9JQL5 133 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 SLC31A2O15432 143 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 SLC34A2O95436 690 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 RAB40ALP0C0E4 278 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 ALOX5APP20292 161 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 IL12BP29460 328 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 HLA-DQA1Q5Y7H0 255 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 NUDCD2Q8WVJ2 157 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 RAB40AQ8WXH6 277 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 UBQLN4Q9NRR5 601 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 IGHV5-51A0A0C4DH38 117 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 P2RY10O00398 339 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 RCC1P18754 421 aaPredicted RBP11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 ITGA3P26006 1051 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 MPPED2Q15777 294 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 ACOT7LQ6ZUV0 252 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 CCDC54Q8NEL0 328 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 ELSPBP1Q96BH3 223 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 PHYHIPLQ96FC7 376 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 AKR1E2Q96JD6 320 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 LURAP1Q96LR2 239 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 IP6K3Q96PC2 410 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 SUCNR1Q9BXA5 334 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 MED29Q9NX70 200 aa11.17□□□□□ -0.62
PRPF40B-202ENST00000380281 H7C417 338 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 AP4M1O00189 453 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 SULT2B1O00204 365 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 ARPC3O15145 178 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 ARG1P05089 322 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 DCNP07585 359 aaKnown RBP11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 AKAIN1P0CW23 69 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 PGAM2P15259 253 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 NME2P22392 152 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 CD1CP29017 333 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 CD80P33681 288 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 PRKXP51817 358 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 CXADRP78310 365 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 INPP5JQ15735 1006 aaPredicted RBP11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 RSPO4Q2I0M5 234 aaPredicted RBP11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 LINC00114Q6XXX2 140 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 BPIFB2Q8N4F0 458 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 FAM24BQ8N5W8 94 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 C15orf54Q8N8G6 183 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 OR5AP2Q8NGF4 316 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 TMEM68Q96MH6 324 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 SEMA6CQ9H3T2 930 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 MTFP1Q9UDX5 166 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 MRPS18BQ9Y676 258 aaKnown RBP11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 TRIOBPQ9H2D6 2365 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 DBX1A6NMT0 343 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 XRCC3O43542 346 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 HLA-AP01891 365 aaKnown RBP11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 ACKR3P25106 362 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 ARL4DP49703 201 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 ZNF117Q03924 483 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 AIMP2Q13155 320 aaKnown RBP11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 SHHQ15465 462 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 NSDHLQ15738 373 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 INO80EQ8NBZ0 244 aaPredicted RBP11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 NAXEQ8NCW5 288 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 OR6N1Q8NGY5 312 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 NPRL2Q8WTW4 380 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 NMNAT2Q9BZQ4 307 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 OR2S2Q9NQN1 319 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 GABRG2P18507 467 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 ID4P47928 161 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 STARD6P59095 220 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 TAS2R60P59551 318 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 NR0B2Q15466 257 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 ATG4DQ86TL0 474 aaPredicted RBP11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 GABRG1Q8N1C3 465 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 OR13C3Q8NGS6 347 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 ZNF417Q8TAU3 575 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 PISDQ9UG56 409 aa11.16□□□□□ -0.62
PRPF40B-202ENST00000380281 CACNA1EQ15878 2313 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 C5orf51A6NDU8 294 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 STMND1H3BQB6 276 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 FGF16O43320 207 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 ZNF749O43361 778 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 CYB5AP00167 134 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 PMP2P02689 132 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 FBXW4P57775 412 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 HGFACQ04756 655 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 PJVKQ0ZLH3 352 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 ZNF141Q15928 474 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 PDZD11Q5EBL8 140 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 RNF144BQ7Z419 303 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms