RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 LIPCP11150 499 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 TDGF1P13385 188 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 ZNF19P17023 458 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 GSTM3P21266 225 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 DTYMKP23919 212 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 OR12D2P58182 307 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 SMIM11AP58511 58 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 IQCJQ1A5X6 159 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 MIDNQ504T8 468 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 RTL6Q6ICC9 239 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 PARS2Q7L3T8 475 aaKnown RBP6.72□□□□□ -1.33
CDKL5-201ENST00000379989 S100A7AQ86SG5 101 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 ZNF100Q8IYN0 542 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 GABRG1Q8N1C3 465 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 MFSD9Q8NBP5 474 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 OR10H4Q8NGA5 316 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 OR8S1Q8NH09 359 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 CORO2AQ92828 525 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 MYADMQ96S97 322 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 SYNPO2LQ9H987 977 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 KCNJ16Q9NPI9 418 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 HCFC1R1Q9NWW0 138 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 B3GAT1Q9P2W7 334 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 SRPK3Q9UPE1 567 aa6.72□□□□□ -1.33
CDKL5-201ENST00000379989 PRAMEF4O60810 478 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 TSPAN15O95858 294 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 FGF5P12034 268 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 NTSP30990 170 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 LBX1P52954 281 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 UCP2P55851 309 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 TAS2R19P59542 299 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 RPS11P62280 158 aaKnown RBP eCLIP6.71□□□□□ -1.33
CDKL5-201ENST00000379989 RUNX3Q13761 415 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 NKAIN1Q4KMZ8 207 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 COL5A1-AS1Q5SY13 56 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 PRAMEF9Q5VWM5 478 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 TMEM268Q5VZI3 342 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 TMEM215Q68D42 235 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 REEP3Q6NUK4 255 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 AGTRAPQ6RW13 159 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 LKAAEAR1Q8TD35 194 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 NEIL2Q969S2 332 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 PGAM5Q96HS1 289 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 PARP12Q9H0J9 701 aaKnown RBP6.71□□□□□ -1.33
CDKL5-201ENST00000379989 SLC25A18Q9H1K4 315 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 SLC35B3Q9H1N7 401 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 NRIP3Q9NQ35 241 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 AURKAIP1Q9NWT8 199 aaPredicted RBP6.71□□□□□ -1.33
CDKL5-201ENST00000379989 TAS2R8Q9NYW2 309 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 CNIH4Q9P003 139 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 ST6GALNAC2Q9UJ37 374 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 WNT6Q9Y6F9 365 aa6.71□□□□□ -1.33
CDKL5-201ENST00000379989 H7BY64 318 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 AQP7O14520 342 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 GPR37L1O60883 481 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 NDUFB8O95169 186 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 DCNP07585 359 aaKnown RBP6.71□□□□□ -1.34
CDKL5-201ENST00000379989 UMODP07911 640 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 HOXB2P14652 356 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 UCP3P55916 312 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 PFN3P60673 137 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 ITPRIPL2Q3MIP1 535 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 RPL7L1Q6DKI1 246 aaKnown RBP6.71□□□□□ -1.34
CDKL5-201ENST00000379989 AWAT2Q6E213 333 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 SLC35D2Q76EJ3 337 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 CDS1Q92903 461 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 SAMD8Q96LT4 415 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 SMIM14Q96QK8 99 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 METTL8Q9H825 291 aaKnown RBP6.71□□□□□ -1.34
CDKL5-201ENST00000379989 TAF9BQ9HBM6 251 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 CXXC1Q9P0U4 656 aaPredicted RBP6.71□□□□□ -1.34
CDKL5-201ENST00000379989 UPB1Q9UBR1 384 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 RNF150Q9ULK6 438 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 M0R3H8 397 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 RPP14O95059 124 aaKnown RBP6.71□□□□□ -1.34
CDKL5-201ENST00000379989 C1orf105O95561 183 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 CNOT4O95628 575 aaKnown RBP6.71□□□□□ -1.34
CDKL5-201ENST00000379989 HPRT1P00492 218 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 PYCR1P32322 319 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 NAA10P41227 235 aaPredicted RBP6.71□□□□□ -1.34
CDKL5-201ENST00000379989 GPR1P46091 355 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 POLR2HP52434 150 aaKnown RBP6.71□□□□□ -1.34
CDKL5-201ENST00000379989 TAS2R43P59537 309 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 UBE2KP61086 200 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 SNRPNP63162 240 aaKnown RBP6.71□□□□□ -1.34
CDKL5-201ENST00000379989 GAB4Q2WGN9 574 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 FAM78AQ5JUQ0 283 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 TMEM108Q6UXF1 575 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 ZNF836Q6ZNA1 936 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 Q6ZVL8 140 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 CMTM1Q8IZ96 169 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 PLPP5Q8NEB5 264 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 OR1P1Q8NH06 330 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 MIB2Q96AX9 1013 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 RAB39BQ96DA2 213 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 MRGPRX1Q96LB2 322 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 SGCZQ96LD1 299 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 COMMD4Q9H0A8 199 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 MED20Q9H944 212 aa6.71□□□□□ -1.34
CDKL5-201ENST00000379989 MYNNQ9NPC7 610 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms