RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 MPV17P39210 176 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 CAPGP40121 348 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 CX3CR1P49238 355 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 PRKXP51817 358 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 EFNA4P52798 201 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 HCCSP53701 268 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 EGR3Q06889 387 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 NKPD1Q17RQ9 610 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 KRT77Q7Z794 578 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 ZNF679Q8IYX0 411 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 CMBLQ96DG6 245 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 VRK1Q99986 396 aaPredicted RBP11.34□□□□□ -0.59
CKAP2-202ENST00000378034 MYEF2Q9P2K5 600 aaKnown RBP11.34□□□□□ -0.59
CKAP2-202ENST00000378034 ACOD1A6NK06 481 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 ATP6V1G2O95670 118 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 F12P00748 615 aaPredicted RBP11.33□□□□□ -0.6
CKAP2-202ENST00000378034 IGHV4-39P01824 125 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 SELEP16581 610 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 IL5RAQ01344 420 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 PSG7Q13046 419 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 ZMAT1Q5H9K5 638 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 SPNS3Q6ZMD2 512 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 NAA40Q86UY6 237 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 OR52H1Q8NGJ2 320 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 NRG4Q8WWG1 115 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 OR8B4Q96RC9 309 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 POFUT1Q9H488 388 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 OPA3Q9H6K4 179 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 PTTG3PQ9NZH4 202 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 PURGQ9UJV8 347 aaKnown RBP11.33□□□□□ -0.6
CKAP2-202ENST00000378034 COPS3Q9UNS2 423 aa11.33□□□□□ -0.6
CKAP2-202ENST00000378034 CCDC168Q8NDH2 2452 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 PLSCR5A0PG75 271 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 XRCC2O43543 280 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 ALDH3B1P43353 468 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 CXCR4P61073 352 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 ACTC1P68032 377 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 ACTA1P68133 377 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 MAD2L1BPQ15013 274 aaPredicted RBP11.32□□□□□ -0.6
CKAP2-202ENST00000378034 PCGF3Q3KNV8 242 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 Q5PR19 223 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 ZNF322Q6U7Q0 402 aaPredicted RBP11.32□□□□□ -0.6
CKAP2-202ENST00000378034 LRRN1Q6UXK5 716 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 RNFT2Q96EX2 444 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 SORCS2Q96PQ0 1159 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 MYCBPQ99417 103 aaPredicted RBP11.32□□□□□ -0.6
CKAP2-202ENST00000378034 MYOZ1Q9NP98 299 aaPredicted RBP11.32□□□□□ -0.6
CKAP2-202ENST00000378034 NKIRAS2Q9NYR9 191 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 EXOGQ9Y2C4 368 aaKnown RBP11.32□□□□□ -0.6
CKAP2-202ENST00000378034 RPL36Q9Y3U8 105 aaKnown RBP11.32□□□□□ -0.6
CKAP2-202ENST00000378034 LRP12Q9Y561 859 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 CSMD1Q96PZ7 3565 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 C17orf100A8MU93 164 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 TIMM8AO60220 97 aaPredicted RBP11.32□□□□□ -0.6
CKAP2-202ENST00000378034 MMP15P51511 669 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 RIDAP52758 137 aaKnown RBP11.32□□□□□ -0.6
CKAP2-202ENST00000378034 DSCR9P59020 149 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 PSMA6P60900 246 aaKnown RBP11.32□□□□□ -0.6
CKAP2-202ENST00000378034 PRSS45Q7RTY3 260 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 APH1BQ8WW43 257 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 DIRC2Q96SL1 478 aa11.32□□□□□ -0.6
CKAP2-202ENST00000378034 MRPS18AQ9NVS2 196 aaKnown RBP11.32□□□□□ -0.6
CKAP2-202ENST00000378034 PRRC2AP48634 2157 aaKnown RBP11.32□□□□□ -0.6
CKAP2-202ENST00000378034 ARID1AO14497 2285 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 USF3Q68DE3 2245 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 MYO9AB2RTY4 2548 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 J3QRE1 110 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 NDUFS7O75251 213 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 ANXA2P07355 339 aaKnown RBP11.31□□□□□ -0.6
CKAP2-202ENST00000378034 ADH4P08319 380 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 DBTP11182 482 aaKnown RBP11.31□□□□□ -0.6
CKAP2-202ENST00000378034 CFL1P23528 166 aaKnown RBP11.31□□□□□ -0.6
CKAP2-202ENST00000378034 ZNF81P51508 661 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 ZNF121P58317 390 aaPredicted RBP11.31□□□□□ -0.6
CKAP2-202ENST00000378034 ISL1P61371 349 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 ZNF91Q05481 1191 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 RAB40BQ12829 278 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 GK2Q14410 553 aaPredicted RBP11.31□□□□□ -0.6
CKAP2-202ENST00000378034 ZNF829Q3KNS6 432 aaPredicted RBP11.31□□□□□ -0.6
CKAP2-202ENST00000378034 SNAI3Q3KNW1 292 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 PGAP1Q75T13 922 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 KRTAP1-3Q8IUG1 177 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 C8orf59Q8N0T1 100 aaPredicted RBP11.31□□□□□ -0.6
CKAP2-202ENST00000378034 OR10H4Q8NGA5 316 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 TFAP2CQ92754 450 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 SPSB4Q96A44 273 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 OR10A2Q9H208 303 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 RGCCQ9H4X1 137 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 AASSQ9UDR5 926 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 ZNF391Q9UJN7 358 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 IKZF2Q9UKS7 526 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 ZDHHC8Q9ULC8 765 aa11.31□□□□□ -0.6
CKAP2-202ENST00000378034 A0A1W2PQL4 384 aaPredicted RBP11.3□□□□□ -0.6
CKAP2-202ENST00000378034 WBP4O75554 376 aaKnown RBP11.3□□□□□ -0.6
CKAP2-202ENST00000378034 SULT1C4O75897 302 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 CLIC3O95833 236 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 CSF3P09919 207 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 SLC2A1P11166 492 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 NAT2P11245 290 aa11.3□□□□□ -0.6
CKAP2-202ENST00000378034 HLXQ14774 488 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms