RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 NXPH1P58417 271 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 QRFPP83859 136 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 ATXN7L3Q14CW9 347 aaPredicted RBP12.95□□□□□ -0.34
MSH5-201ENST00000375703 ACOT7LQ6ZUV0 252 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 RHOUQ7L0Q8 258 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 STT3BQ8TCJ2 826 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 MRGPRFQ96AM1 343 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 ZNF501Q96CX3 271 aaPredicted RBP12.95□□□□□ -0.34
MSH5-201ENST00000375703 UQCC2Q9BRT2 126 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 ZNF471Q9BX82 626 aaPredicted RBP12.95□□□□□ -0.34
MSH5-201ENST00000375703 FOXQ1Q9C009 403 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 SELENOIQ9C0D9 397 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 LDAHQ9H6V9 325 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 CYB5R1Q9UHQ9 305 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 SHISA8B8ZZ34 492 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 PIAS2O75928 621 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 APOC3P02656 99 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 IFNA6P05013 189 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 DCNP07585 359 aaKnown RBP12.95□□□□□ -0.34
MSH5-201ENST00000375703 ERCC1P07992 297 aaPredicted RBP12.95□□□□□ -0.34
MSH5-201ENST00000375703 RAB3AP20336 220 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 MPZP25189 248 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 HRH1P35367 487 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 ANGPTL5Q86XS5 388 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 MITD1Q8WV92 249 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 MESP1Q9BRJ9 268 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 NUDT22Q9BRQ3 303 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 ZC4H2Q9NQZ6 224 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 ATXN7L1Q9ULK2 861 aaPredicted RBP12.95□□□□□ -0.34
MSH5-201ENST00000375703 NUPL2O15504 423 aaKnown RBP12.94□□□□□ -0.34
MSH5-201ENST00000375703 ZNF208O43345 1280 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 BCL2L11O43521 198 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 AKR1C4P17516 323 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 CLDN6P56747 220 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 FOXF1Q12946 379 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 ZNF273Q14593 569 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 ZMYND11Q15326 602 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 KCTD9Q7L273 389 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 APCDD1LQ8NCL9 501 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 OR13C9Q8NGT0 318 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 CASTOR1Q8WTX7 329 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 DNTTIP1Q9H147 329 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 TAS2R3Q9NYW6 316 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 SLC5A6Q9Y289 635 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 B3GALT5Q9Y2C3 310 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 RNF222A6NCQ9 220 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 LIPT2A6NK58 231 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 TSPAN9O75954 239 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 IL2RAP01589 272 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 VAMP1P23763 118 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 DLSTP36957 453 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 GPR85P60893 370 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 AWAT2Q6E213 333 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 MOB3CQ70IA8 216 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 DTWD2Q8NBA8 298 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 THAP6Q8TBB0 222 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 ZNF75AQ96N20 296 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 SERINC1Q9NRX5 453 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 SLC22A11Q9NSA0 550 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 KCNK7Q9Y2U2 307 aa12.94□□□□□ -0.34
MSH5-201ENST00000375703 EFSO43281 561 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 SCGNO76038 276 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 LAP3P28838 519 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 ZNF93P35789 620 aaPredicted RBP12.93□□□□□ -0.34
MSH5-201ENST00000375703 PRKXP51817 358 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 SUMO3P55854 103 aaPredicted RBP12.93□□□□□ -0.34
MSH5-201ENST00000375703 ELP2Q6IA86 826 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 COX15Q7KZN9 410 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 ZNF101Q8IZC7 436 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 ADAD2Q8NCV1 583 aaKnown RBP12.93□□□□□ -0.34
MSH5-201ENST00000375703 CADM4Q8NFZ8 388 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 OR10S1Q8NGN2 331 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 OR10R2Q8NGX6 335 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 SEC61A2Q9H9S3 476 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 RPH3AQ9Y2J0 694 aaPredicted RBP12.93□□□□□ -0.34
MSH5-201ENST00000375703 COL5A1P20908 1838 aaPredicted RBP12.93□□□□□ -0.34
MSH5-201ENST00000375703 OR2AT4A6NND4 320 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 PMP2P02689 132 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 FAHD2BQ6P2I3 314 aaPredicted RBP12.93□□□□□ -0.34
MSH5-201ENST00000375703 INO80EQ8NBZ0 244 aaPredicted RBP12.93□□□□□ -0.34
MSH5-201ENST00000375703 OR51E1Q8TCB6 317 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 FAHD2AQ96GK7 314 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 ALKBH4Q9NXW9 302 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 SEMA5BQ9P283 1151 aa12.93□□□□□ -0.34
MSH5-201ENST00000375703 EEF1E1-BLOC1S5C9J1V9 151 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 EFNA2O43921 213 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 HEXBP07686 556 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 FOSL2P15408 326 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 GLB1P16278 677 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 GSK3AP49840 483 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 THEM4Q5T1C6 240 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 CFAP77Q6ZQR2 320 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 ANKRD37Q7Z713 158 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 NFAM1Q8NET5 270 aaPredicted RBP12.92□□□□□ -0.34
MSH5-201ENST00000375703 SPACA5Q96QH8 159 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 OPN1LWP04000 364 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 ZNF20P17024 532 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 CTRB1P17538 263 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 CNR1P21554 472 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 EMP2P54851 167 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms