RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 HAS2Q92819 552 aa17.62■□□□□ 0.41
TGFBR1-201ENST00000374990 QPCTLQ9NXS2 382 aa17.62■□□□□ 0.41
TGFBR1-201ENST00000374990 MTFP1Q9UDX5 166 aa17.62■□□□□ 0.41
TGFBR1-201ENST00000374990 PLEKHB1Q9UF11 243 aaPredicted RBP17.62■□□□□ 0.41
TGFBR1-201ENST00000374990 SERPINE3A8MV23 424 aa17.62■□□□□ 0.41
TGFBR1-201ENST00000374990 TIMM8AO60220 97 aaPredicted RBP17.62■□□□□ 0.41
TGFBR1-201ENST00000374990 NKX2-1P43699 371 aaPredicted RBP17.62■□□□□ 0.41
TGFBR1-201ENST00000374990 YIPF5Q969M3 257 aa17.62■□□□□ 0.41
TGFBR1-201ENST00000374990 LRP12Q9Y561 859 aa17.62■□□□□ 0.41
TGFBR1-201ENST00000374990 CSAG2Q9Y5P2 127 aa17.62■□□□□ 0.41
TGFBR1-201ENST00000374990 ATG2BQ96BY7 2078 aa17.62■□□□□ 0.41
TGFBR1-201ENST00000374990 TPOP07202 933 aa17.62■□□□□ 0.41
TGFBR1-201ENST00000374990 ABI3BPQ7Z7G0 1075 aa17.62■□□□□ 0.41
TGFBR1-201ENST00000374990 VN1R1Q9GZP7 353 aa17.62■□□□□ 0.41
TGFBR1-201ENST00000374990 KLF13Q9Y2Y9 288 aaPredicted RBP17.62■□□□□ 0.41
TGFBR1-201ENST00000374990 C4orf47A7E2U8 309 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 AKR7A2O43488 359 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 CXCL13O43927 109 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 ABOP16442 354 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 CLINT1Q14677 625 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 SFRP5Q5T4F7 317 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 GLDNQ6ZMI3 551 aaPredicted RBP17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 LHFPL2Q6ZUX7 228 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 LYG2Q86SG7 212 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 COMTD1Q86VU5 262 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 GALNT16Q8N428 558 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 LSMEM1Q8N8F7 131 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 ZNF2Q9BSG1 426 aaPredicted RBP17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 TAF9BQ9HBM6 251 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 RPS10-NUDT3A0A1W2PQS6 291 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 NRASP01111 189 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 IGHA1P01876 353 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 MGMTP16455 207 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 DUSP1P28562 367 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 RPS10P46783 165 aaKnown RBP17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 F2RL1P55085 397 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 ISXQ2M1V0 245 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 TBC1D28Q2M2D7 210 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 POLDIP2Q9Y2S7 368 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 NRXN2Q9P2S2 1712 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 A0A1W2PPV9 198 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 HSPB6O14558 160 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 TNFSF14O43557 240 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 COL9A1P20849 921 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 ZBTB37Q5TC79 503 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 BAP18Q8IXM2 172 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 OR11L1Q8NGX0 322 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 TERB2Q8NHR7 220 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 ZNF416Q9BWM5 594 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 PLEKHA2Q9HB19 425 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 GCM1Q9NP62 436 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 PUS1Q9Y606 427 aaKnown RBP eCLIP17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 ZFC3H1O60293 1989 aaKnown RBP17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 IGHV1OR21-1A0A087WYE8 117 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 ATPAF1Q5TC12 328 aaPredicted RBP17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 NGBQ9NPG2 151 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 SMCO4Q9NRQ5 59 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 IGHV5-51A0A0C4DH38 117 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 WDR38Q5JTN6 314 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 ELFN2Q5R3F8 820 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 DMKNQ6E0U4 476 aaPredicted RBP17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 LAIR1Q6GTX8 287 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 UBL7Q96S82 380 aaPredicted RBP17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 SLCO1B1Q9Y6L6 691 aa17.61■□□□□ 0.41
TGFBR1-201ENST00000374990 XIRP1Q702N8 1843 aaKnown RBP17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 OR5H8P0DN80 308 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 ADRA2CP18825 462 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 HRH1P35367 487 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 GABRA2P47869 451 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 KCNRGQ8N5I3 272 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 ZNF610Q8N9Z0 462 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 PTDSS2Q9BVG9 487 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 F10P00742 488 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 TAF9Q16594 264 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 H3F3CQ6NXT2 135 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 OR4D11Q8NGI4 311 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 BTF3L4Q96K17 158 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 FLVCR1Q9Y5Y0 555 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 KPTNQ9Y664 436 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 SNCAP37840 140 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 TMEM92Q6UXU6 159 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 C17orf47Q8NEP4 570 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 NIPSNAP3BQ9BS92 247 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 PRELID3BQ9Y3B1 194 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 DOCK3Q8IZD9 2030 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 OR6C6A6NF89 314 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 ANKRD16Q6P6B7 361 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 SLC39A9Q9NUM3 307 aa17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 ZNF629Q9UEG4 869 aaPredicted RBP17.6■□□□□ 0.41
TGFBR1-201ENST00000374990 C17orf112F2Z3M2 114 aa17.59■□□□□ 0.41
TGFBR1-201ENST00000374990 CT62P0C5K7 136 aa17.59■□□□□ 0.41
TGFBR1-201ENST00000374990 ZNF121P58317 390 aaPredicted RBP17.59■□□□□ 0.41
TGFBR1-201ENST00000374990 MRPS34P82930 218 aaKnown RBP17.59■□□□□ 0.41
TGFBR1-201ENST00000374990 SHEQ5VZ18 495 aa17.59■□□□□ 0.41
TGFBR1-201ENST00000374990 MAMSTRQ6ZN01 415 aa17.59■□□□□ 0.41
TGFBR1-201ENST00000374990 GLCCI1Q86VQ1 547 aa17.59■□□□□ 0.41
TGFBR1-201ENST00000374990 UQCC2Q9BRT2 126 aa17.59■□□□□ 0.41
TGFBR1-201ENST00000374990 FAM60AQ9NP50 221 aa17.59■□□□□ 0.41
TGFBR1-201ENST00000374990 PLSCR3Q9NRY6 295 aa17.59■□□□□ 0.41
TGFBR1-201ENST00000374990 CLDN1O95832 211 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms