RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SLC6A15Q9H2J7 730 aa15.84■□□□□ 0.13
HLA-DQB1-201ENST00000374943 ACKR4Q9NPB9 350 aa15.84■□□□□ 0.13
HLA-DQB1-201ENST00000374943 CTAG2O75638 210 aa15.83■□□□□ 0.13
HLA-DQB1-201ENST00000374943 KRT33AO76009 404 aa15.83■□□□□ 0.13
HLA-DQB1-201ENST00000374943 APOC1P02654 83 aa15.83■□□□□ 0.13
HLA-DQB1-201ENST00000374943 SRP9P49458 86 aaKnown RBP15.83■□□□□ 0.13
HLA-DQB1-201ENST00000374943 SPOCK1Q08629 439 aa15.83■□□□□ 0.13
HLA-DQB1-201ENST00000374943 PLA2G7Q13093 441 aa15.83■□□□□ 0.13
HLA-DQB1-201ENST00000374943 RSBN1Q5VWQ0 802 aaPredicted RBP15.83■□□□□ 0.13
HLA-DQB1-201ENST00000374943 DOK3Q7L591 496 aa15.83■□□□□ 0.13
HLA-DQB1-201ENST00000374943 VASH2Q86V25 355 aa15.83■□□□□ 0.13
HLA-DQB1-201ENST00000374943 GLCCI1Q86VQ1 547 aa15.83■□□□□ 0.13
HLA-DQB1-201ENST00000374943 OR1M1Q8NGA1 313 aa15.83■□□□□ 0.13
HLA-DQB1-201ENST00000374943 ABHD3Q8WU67 409 aa15.83■□□□□ 0.13
HLA-DQB1-201ENST00000374943 PTX4Q96A99 478 aa15.83■□□□□ 0.13
HLA-DQB1-201ENST00000374943 ZNF775Q96BV0 537 aaPredicted RBP15.83■□□□□ 0.13
HLA-DQB1-201ENST00000374943 CRLF2Q9HC73 371 aa15.83■□□□□ 0.13
HLA-DQB1-201ENST00000374943 TMEM272A0A1B0GTI8 110 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 HMX3A6NHT5 357 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ACOT7O00154 380 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 LDLRAD4O15165 306 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ORC5O43913 435 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ECDO95905 644 aaPredicted RBP15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 TMIGD3P0DMS9 266 aaPredicted RBP15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 CEACAM1P13688 526 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 HLA-DMAP28067 261 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 BTG1P62324 171 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 STK11Q15831 433 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 RNASE12Q5GAN4 147 aaKnown RBP15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 GLYATL3Q5SZD4 288 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 TMPRSS7Q7RTY8 843 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ABHD12BQ7Z5M8 362 aaPredicted RBP15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 LRRC18Q8N456 261 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 FAM109AQ8N4B1 249 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 OR5D14Q8NGL3 314 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 OR52I2Q8NH67 350 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 FCAMRQ8WWV6 532 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 FBXO17Q96EF6 278 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SORCS2Q96PQ0 1159 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ZNF552Q9H707 407 aaPredicted RBP15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 RNF122Q9H9V4 155 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 TMEM138Q9NPI0 162 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 GPR84Q9NQS5 396 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 COPZ2Q9P299 210 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ZNF319Q9P2F9 582 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SLC5A6Q9Y289 635 aa15.83■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ARHGAP21Q5T5U3 1957 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 CNOT1A5YKK6 2376 aaKnown RBP15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 A0A0U1RQV5 110 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 CIB4A0PJX0 185 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 GGT3PA6NGU5 568 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 A6NL46 340 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ACTL6AO96019 429 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SLC2A1P11166 492 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 GABRA1P14867 456 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ZNF20P17024 532 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 EFNB2P52799 333 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 PPIAP62937 165 aaKnown RBP15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 RAB35Q15286 201 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 Q6ZSR3 168 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 FAM57BQ71RH2 274 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ADGRE4PQ86SQ3 457 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 TMEM178AQ8NBL3 297 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 UQCC2Q9BRT2 126 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 LINC00470Q9BZP3 86 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 DPAGT1Q9H3H5 408 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 DIABLOQ9NR28 239 aa15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 CGGBP1Q9UFW8 167 aaPredicted RBP15.82■□□□□ 0.12
HLA-DQB1-201ENST00000374943 DCDC2BA2VCK2 349 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 TM4SF5O14894 197 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SYNGR4O95473 234 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ERCC1P07992 297 aaPredicted RBP15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ARSBP15848 533 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 RAB3AP20336 220 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 GNALP38405 381 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 EIF2B2P49770 351 aaKnown RBP15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 AP3S2P59780 193 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ARG2P78540 354 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ECH1Q13011 328 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 TATDN3Q17R31 274 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 RSPO1Q2MKA7 263 aaPredicted RBP15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 NRN1LQ496H8 165 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ZNF766Q5HY98 468 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 PGAP1Q75T13 922 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 CDH26Q8IXH8 852 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 JAGN1Q8N5M9 183 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 CCDC54Q8NEL0 328 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 PGAM5Q96HS1 289 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 ALKBH3Q96Q83 286 aaPredicted RBP15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 METTL17Q9H7H0 456 aaPredicted RBP15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 GPR35Q9HC97 309 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 EMC3Q9P0I2 261 aa15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 MCTS1Q9ULC4 181 aaKnown RBP15.81■□□□□ 0.12
HLA-DQB1-201ENST00000374943 INMT-MINDY4F8WBC2 141 aa15.8■□□□□ 0.12
HLA-DQB1-201ENST00000374943 NKX2-8O15522 239 aa15.8■□□□□ 0.12
HLA-DQB1-201ENST00000374943 CCNKO75909 580 aa15.8■□□□□ 0.12
HLA-DQB1-201ENST00000374943 CRYGSP22914 178 aa15.8■□□□□ 0.12
HLA-DQB1-201ENST00000374943 GALK2Q01415 458 aa15.8■□□□□ 0.12
HLA-DQB1-201ENST00000374943 SCRN3Q0VDG4 424 aa15.8■□□□□ 0.12
HLA-DQB1-201ENST00000374943 BIVMQ86UB2 503 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms