RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 GAL3ST3Q96A11 431 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 MUCL1Q96DR8 90 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 AMELYQ99218 206 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 ATG101Q9BSB4 218 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 PTGES2Q9H7Z7 377 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 KCNJ16Q9NPI9 418 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 ARID1AO14497 2285 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 ZNF587BE7ETH6 402 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 TBC1D3HP0C7X1 549 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 CEBPBP17676 345 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 ID2Q02363 134 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 ZNF616Q08AN1 781 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 RASGEF1BQ0VAM2 473 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 FOXO1Q12778 655 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 MESTQ5EB52 335 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 ZNF385CQ66K41 422 aaPredicted RBP18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 OR10AD1Q8NGE0 317 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 WFIKKN2Q8TEU8 576 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 WDR76Q9H967 626 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 GSKIPQ9P0R6 139 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 DNAJB11Q9UBS4 358 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 GTF2A1LQ9UNN4 478 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 FBXO7Q9Y3I1 522 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 OR5H15A6NDH6 313 aa18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 OR5H1A6NKK0 313 aa18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 CXCL1P09341 107 aa18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 NR2C1P13056 603 aa18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 TMEM225Q6GV28 225 aa18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 ZNF343Q6P1L6 599 aa18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 LINC00114Q6XXX2 140 aa18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 ADGRE4PQ86SQ3 457 aa18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 AQP3Q92482 292 aa18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 NUDT9Q9BW91 350 aa18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 SMIM3Q9BZL3 60 aa18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 MVB12AQ96EY5 273 aa18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 MKKSQ9NPJ1 570 aaPredicted RBP18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 TAS2R4Q9NYW5 299 aa18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 CHD7Q9P2D1 2997 aa18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 SNRNP200O75643 2136 aaKnown RBP18.42■□□□□ 0.54
TMEFF1-201ENST00000374879 H7C1C5 153 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 IFNA6P05013 189 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 FHITP49789 147 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 LCN6P62502 163 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 HNRNPA1L2Q32P51 320 aaKnown RBP18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 KIRREL2Q6UWL6 708 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 EXD3Q8N9H8 876 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 TMEM104Q8NE00 496 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 RAB18Q9NP72 206 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 ALPK2Q86TB3 2170 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 ZNF724A8MTY0 619 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 MKRN2OSH3BPM6 223 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 RAMP1O60894 148 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 CD81P60033 236 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 ZNF260Q3ZCT1 412 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 TMEM128Q5BJH2 165 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 PHF19Q5T6S3 580 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 C1orf53Q5VUE5 145 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 CLEC18BQ6UXF7 455 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 MDGA2Q7Z553 956 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 OR51A2Q8NGJ7 313 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 TMEM230Q96A57 120 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 SLC35B3Q9H1N7 401 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 SLC26A1Q9H2B4 701 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 METTL8Q9H825 291 aaKnown RBP18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 PTPRSQ13332 1948 aa18.41■□□□□ 0.54
TMEFF1-201ENST00000374879 LDLRAD4O15165 306 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 ZNF354AO60765 605 aaPredicted RBP18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 TIMP1P01033 207 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 ALOX5APP20292 161 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 THBS4P35443 961 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 CEACAM6P40199 344 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 OR6X1Q8NH79 312 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 Q8WTZ3 238 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 ZNF587Q96SQ5 575 aaPredicted RBP18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 CAPN10Q9HC96 672 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 A8MWP6 167 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 PHOX2AO14813 284 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 PI3P19957 117 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 UCP2P55851 309 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 SPEM2Q0P670 501 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 SRSF5Q13243 272 aaKnown RBP18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 ELAVL3Q14576 367 aaKnown RBP18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 UBE2V2Q15819 145 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 ANKRD55Q3KP44 614 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 SFTPA1Q8IWL2 248 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 CSNK1A1LQ8N752 337 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 CHST4Q8NCG5 386 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 OR13C9Q8NGT0 318 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 BCO1Q9HAY6 547 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 CRLF2Q9HC73 371 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 FBXL17Q9UF56 701 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 FBXL21Q9UKT6 434 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 PIAS3Q9Y6X2 628 aa18.4■□□□□ 0.54
TMEFF1-201ENST00000374879 EDDM13A0A1B0GTR0 161 aa18.39■□□□□ 0.54
TMEFF1-201ENST00000374879 BRINP1O60477 761 aa18.39■□□□□ 0.54
TMEFF1-201ENST00000374879 IL2RGP31785 369 aa18.39■□□□□ 0.54
TMEFF1-201ENST00000374879 GABRA3P34903 492 aa18.39■□□□□ 0.54
TMEFF1-201ENST00000374879 TAS2R31P59538 309 aa18.39■□□□□ 0.54
TMEFF1-201ENST00000374879 NHLH2Q02577 135 aa18.39■□□□□ 0.54
TMEFF1-201ENST00000374879 MTSS1LQ765P7 747 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms