RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 PPP3CBP16298 524 aa15.2■□□□□ 0.02
PFDN6-201ENST00000374606 STOMP27105 288 aa15.2■□□□□ 0.02
PFDN6-201ENST00000374606 APEX1P27695 318 aaKnown RBP15.2■□□□□ 0.02
PFDN6-201ENST00000374606 OTX1P32242 354 aaPredicted RBP15.2■□□□□ 0.02
PFDN6-201ENST00000374606 SLC6A9P48067 706 aa15.2■□□□□ 0.02
PFDN6-201ENST00000374606 GDI2P50395 445 aaKnown RBP15.2■□□□□ 0.02
PFDN6-201ENST00000374606 GTF2A1P52655 376 aaPredicted RBP15.2■□□□□ 0.02
PFDN6-201ENST00000374606 TPTEP56180 551 aa15.2■□□□□ 0.02
PFDN6-201ENST00000374606 MFGE8Q08431 387 aaPredicted RBP15.2■□□□□ 0.02
PFDN6-201ENST00000374606 CDK5R1Q15078 307 aa15.2■□□□□ 0.02
PFDN6-201ENST00000374606 PPA1Q15181 289 aa15.2■□□□□ 0.02
PFDN6-201ENST00000374606 TAB1Q15750 504 aa15.2■□□□□ 0.02
PFDN6-201ENST00000374606 TSTQ16762 297 aaKnown RBP15.2■□□□□ 0.02
PFDN6-201ENST00000374606 RPL22L1Q6P5R6 122 aaKnown RBP15.2■□□□□ 0.02
PFDN6-201ENST00000374606 SSX8Q7RTT4 187 aa15.2■□□□□ 0.02
PFDN6-201ENST00000374606 GPR141Q7Z602 305 aa15.2■□□□□ 0.02
PFDN6-201ENST00000374606 ZNF584Q8IVC4 421 aa15.2■□□□□ 0.02
PFDN6-201ENST00000374606 HSD17B8Q92506 261 aa15.2■□□□□ 0.02
PFDN6-201ENST00000374606 SLC7A6Q92536 515 aa15.2■□□□□ 0.02
PFDN6-201ENST00000374606 ZNF75AQ96N20 296 aa15.2■□□□□ 0.02
PFDN6-201ENST00000374606 TMUB1Q9BVT8 246 aa15.2■□□□□ 0.02
PFDN6-201ENST00000374606 MOB1AQ9H8S9 216 aa15.2■□□□□ 0.02
PFDN6-201ENST00000374606 PNMA8CA0A1B0GUJ8 204 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 SRSF10O75494 262 aaKnown RBP15.19■□□□□ 0.02
PFDN6-201ENST00000374606 IGKV3-15P01624 115 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 ANXA2P07355 339 aaKnown RBP15.19■□□□□ 0.02
PFDN6-201ENST00000374606 ZNF14P17017 642 aaPredicted RBP15.19■□□□□ 0.02
PFDN6-201ENST00000374606 CELP19835 753 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 MMP16P51512 607 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 ZNF121P58317 390 aaPredicted RBP15.19■□□□□ 0.02
PFDN6-201ENST00000374606 SORDQ00796 357 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 ALKBH1Q13686 389 aaKnown RBP15.19■□□□□ 0.02
PFDN6-201ENST00000374606 TBC1D28Q2M2D7 210 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 BCL2L15Q5TBC7 163 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 LIPKQ5VXJ0 399 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 FDX2Q6P4F2 183 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 ARL9Q6T311 187 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 DRAM2Q6UX65 266 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 FAM169BQ8N8A8 192 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 SLC30A7Q8NEW0 376 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 OR2G2Q8NGZ5 317 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 SMIM19Q96E16 107 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 MS4A3Q96HJ5 214 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 C4orf45Q96LM5 186 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 C1QTNF6Q9BXI9 259 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 BRD7Q9NPI1 651 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 FAM206AQ9NX38 181 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 ST6GALNAC2Q9UJ37 374 aa15.19■□□□□ 0.02
PFDN6-201ENST00000374606 TRBV2A0A0J9YWF9 115 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 FAM221AA4D161 298 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 C5orf49A4QMS7 147 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 CCRL2O00421 344 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 PNPP00491 289 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 CELA3BP08861 270 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 ACSM4P0C7M7 580 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 SLC2A1P11166 492 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 CPEP16870 476 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 IGFBP2P18065 325 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 NANOS3P60323 173 aaKnown RBP15.18■□□□□ 0.02
PFDN6-201ENST00000374606 KRTAP27-1Q3LI81 207 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 WDR38Q5JTN6 314 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 DMKNQ6E0U4 476 aaPredicted RBP15.18■□□□□ 0.02
PFDN6-201ENST00000374606 ALKBH2Q6NS38 261 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 CATSPERDQ86XM0 798 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 OR1J2Q8NGS2 313 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 OR13F1Q8NGS4 319 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 RNF166Q96A37 237 aaPredicted RBP15.18■□□□□ 0.02
PFDN6-201ENST00000374606 POM121L2Q96KW2 1035 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 DCLRE1CQ96SD1 692 aaKnown RBP15.18■□□□□ 0.02
PFDN6-201ENST00000374606 CDH20Q9HBT6 801 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 CRNNQ9UBG3 495 aaPredicted RBP15.18■□□□□ 0.02
PFDN6-201ENST00000374606 OR52A1Q9UKL2 312 aa15.18■□□□□ 0.02
PFDN6-201ENST00000374606 SIRT4Q9Y6E7 314 aaPredicted RBP15.18■□□□□ 0.02
PFDN6-201ENST00000374606 LOC100509620A0A075B734 347 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 OGG1O15527 345 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 IGLV1-44P01699 117 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 CCNOP22674 350 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 LIPAP38571 399 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 RGS6P49758 472 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 ZNF83P51522 516 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 CCR9P51686 369 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 SLC3A1Q07837 685 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 TPBGQ13641 420 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 FAM57BQ71RH2 274 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 MYPOPQ86VE0 399 aaPredicted RBP15.17■□□□□ 0.02
PFDN6-201ENST00000374606 SATL1Q86VE3 508 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 TMEM200AQ86VY9 491 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 PHC2Q8IXK0 858 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 RPS4Y2Q8TD47 263 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 TMIGD2Q96BF3 282 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 PGAM5Q96HS1 289 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 MED18Q9BUE0 208 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 COMMD4Q9H0A8 199 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 NDUFB11Q9NX14 153 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 FRRS1LQ9P0K9 344 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 NUFIP1Q9UHK0 495 aaKnown RBP15.17■□□□□ 0.02
PFDN6-201ENST00000374606 ZNF469Q96JG9 3925 aaPredicted RBP15.17■□□□□ 0.02
PFDN6-201ENST00000374606 ABCA4P78363 2273 aa15.17■□□□□ 0.02
PFDN6-201ENST00000374606 IGHV1-18A0A0C4DH31 117 aa15.16■□□□□ 0.02
PFDN6-201ENST00000374606 ACOD1A6NK06 481 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms