RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 MPZP25189 248 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 SRP9P49458 86 aaKnown RBP11.03□□□□□ -0.64
PRPF4-202ENST00000374199 RTP5Q14D33 572 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 SLC25A25Q6KCM7 469 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 KLHL24Q6TFL4 600 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 PGAP1Q75T13 922 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 OR1M1Q8NGA1 313 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 OR52I2Q8NH67 350 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 BOD1Q96IK1 185 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 ZNF552Q9H707 407 aaPredicted RBP11.03□□□□□ -0.64
PRPF4-202ENST00000374199 GP6Q9HCN6 339 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 CDV3Q9UKY7 258 aaKnown RBP11.03□□□□□ -0.64
PRPF4-202ENST00000374199 ARHGAP21Q5T5U3 1957 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 TMEM14DPA8MWL7 114 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 PROB1E7EW31 1015 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 CXCL13O43927 109 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 PRF1P14222 555 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 TMEM255AQ5JRV8 349 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 ZNF100Q8IYN0 542 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 PIAS4Q8N2W9 510 aaPredicted RBP11.03□□□□□ -0.64
PRPF4-202ENST00000374199 CLEC1AQ8NC01 280 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 GPX8Q8TED1 209 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 SORCS2Q96PQ0 1159 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 TMEM138Q9NPI0 162 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 NLKQ9UBE8 527 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 CD3GP09693 182 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 BDKRB2P30411 391 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 TMEM69Q5SWH9 247 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 ATAD3CQ5T2N8 411 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 PDSS1Q5T2R2 415 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 PLET1Q6UQ28 207 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 BTN2A1Q7KYR7 527 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.02□□□□□ -0.64
PRPF4-202ENST00000374199 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.02□□□□□ -0.64
PRPF4-202ENST00000374199 TOMM5Q8N4H5 51 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 OR51D1Q8NGF3 324 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 OR4D6Q8NGJ1 314 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 AQP3Q92482 292 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 HDHD2Q9H0R4 259 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 GPR35Q9HC97 309 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 HRASLSQ9HDD0 168 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 PAIP2BQ9ULR5 123 aaKnown RBP11.02□□□□□ -0.64
PRPF4-202ENST00000374199 SSUH2Q9Y2M2 353 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 ALG5Q9Y673 324 aa11.02□□□□□ -0.64
PRPF4-202ENST00000374199 DMXL1Q9Y485 3027 aa11.02□□□□□ -0.65
PRPF4-202ENST00000374199 KRT33AO76009 404 aa11.02□□□□□ -0.65
PRPF4-202ENST00000374199 IGHG3P01860 377 aa11.02□□□□□ -0.65
PRPF4-202ENST00000374199 ECH1Q13011 328 aa11.02□□□□□ -0.65
PRPF4-202ENST00000374199 UNC119Q13432 240 aa11.02□□□□□ -0.65
PRPF4-202ENST00000374199 COLCA1Q6ZS62 124 aa11.02□□□□□ -0.65
PRPF4-202ENST00000374199 OR2W3Q7Z3T1 314 aa11.02□□□□□ -0.65
PRPF4-202ENST00000374199 SCPEP1Q9HB40 452 aa11.02□□□□□ -0.65
PRPF4-202ENST00000374199 ALPK2Q86TB3 2170 aa11.02□□□□□ -0.65
PRPF4-202ENST00000374199 ZNF292O60281 2723 aa11.02□□□□□ -0.65
PRPF4-202ENST00000374199 C5orf63A6NC05 138 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 ARSBP15848 533 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 ZNF84P51523 738 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 RRADP55042 308 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 TPTEP56180 551 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 GUSBP1Q15486 140 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 ODF4Q2M2E3 257 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 TMEM42Q69YG0 159 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 SLC16A14Q7RTX9 510 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 SPSB4Q96A44 273 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 ULBP2Q9BZM5 246 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 SLC5A6Q9Y289 635 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 IGKV1-9A0A0C4DH69 117 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 FAM240BA0A1B0GVZ2 78 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 OR6C65A6NJZ3 312 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 TNFRSF10AO00220 468 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 SYT7O43581 403 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 APOC1P02654 83 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 TCRBP04435 133 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 CEACAM1P13688 526 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 MAGEA5P43359 124 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 STARP49675 285 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 GLYATL3Q5SZD4 288 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 FAM109AQ8N4B1 249 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 OR5D14Q8NGL3 314 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 OR51E1Q8TCB6 317 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 FCAMRQ8WWV6 532 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 FGGYQ96C11 551 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 ZNF845Q96IR2 970 aaPredicted RBP11.01□□□□□ -0.65
PRPF4-202ENST00000374199 CNTD2Q9H8S5 307 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 SEC61A2Q9H9S3 476 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.01□□□□□ -0.65
PRPF4-202ENST00000374199 CENPMQ9NSP4 180 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 NAT2P11245 290 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 ITGA3P26006 1051 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 MEOX1P50221 254 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 HGFACQ04756 655 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 DRAM2Q6UX65 266 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 SLC22A24Q8N4F4 322 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 OR6N1Q8NGY5 312 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 DPAGT1Q9H3H5 408 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 ZNF391Q9UJN7 358 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 NPTNQ9Y639 398 aa11.01□□□□□ -0.65
PRPF4-202ENST00000374199 SPAARA0A1B0GVQ0 90 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 KLRC4-KLRK1H3BQV0 150 aa11□□□□□ -0.65
PRPF4-202ENST00000374199 THBS4P35443 961 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms