RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 ARSGQ96EG1 525 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 LMF1Q96S06 567 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 NUDT9Q9BW91 350 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 HRH4Q9H3N8 390 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 RAB18Q9NP72 206 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 GOLGA4Q13439 2230 aaKnown RBP17.04■□□□□ 0.32
CMTM3-201ENST00000361909 LOC390937A0A1W2PQ73 354 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 VAMP1P23763 118 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 CPT2P23786 658 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 AVPR2P30518 371 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 SERPINF1P36955 418 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 CAPZBP47756 277 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 CTXN1P60606 82 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 ZNF74Q16587 644 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 TEX30Q5JUR7 227 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 MAML2Q8IZL2 1156 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-201ENST00000361909 COMMD1Q8N668 190 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 RNF128Q8TEB7 428 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 C3orf49Q96BT1 292 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 OCSTAMPQ9BR26 566 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 G6PC3Q9BUM1 346 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 ULBP3Q9BZM4 244 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 RAB33BQ9H082 229 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 CACFD1Q9UGQ2 172 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 RPH3AQ9Y2J0 694 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-201ENST00000361909 FAM96BQ9Y3D0 163 aa17.04■□□□□ 0.32
CMTM3-201ENST00000361909 TNRC6BQ9UPQ9 1833 aaKnown RBP17.03■□□□□ 0.32
CMTM3-201ENST00000361909 FCGR3AP08637 254 aa17.03■□□□□ 0.32
CMTM3-201ENST00000361909 ID2Q02363 134 aa17.03■□□□□ 0.32
CMTM3-201ENST00000361909 SLC17A1Q14916 467 aa17.03■□□□□ 0.32
CMTM3-201ENST00000361909 C1orf100Q5SVJ3 147 aa17.03■□□□□ 0.32
CMTM3-201ENST00000361909 KCTD9Q7L273 389 aa17.03■□□□□ 0.32
CMTM3-201ENST00000361909 DPY19L4Q7Z388 723 aa17.03■□□□□ 0.32
CMTM3-201ENST00000361909 WDSUB1Q8N9V3 476 aa17.03■□□□□ 0.32
CMTM3-201ENST00000361909 DTWD2Q8NBA8 298 aa17.03■□□□□ 0.32
CMTM3-201ENST00000361909 TSSK2Q96PF2 358 aa17.03■□□□□ 0.32
CMTM3-201ENST00000361909 ELF4Q99607 663 aaPredicted RBP17.03■□□□□ 0.32
CMTM3-201ENST00000361909 SULT4A1Q9BR01 284 aa17.03■□□□□ 0.32
CMTM3-201ENST00000361909 NUDT16L1Q9BRJ7 211 aaKnown RBP17.03■□□□□ 0.32
CMTM3-201ENST00000361909 PAPOLGQ9BWT3 736 aaKnown RBP17.03■□□□□ 0.32
CMTM3-201ENST00000361909 GRHPRQ9UBQ7 328 aa17.03■□□□□ 0.32
CMTM3-201ENST00000361909 PILRBQ9UKJ0 227 aa17.03■□□□□ 0.32
CMTM3-201ENST00000361909 TMED7Q9Y3B3 224 aa17.03■□□□□ 0.32
CMTM3-201ENST00000361909 FAM157AC9JC47 383 aa17.02■□□□□ 0.32
CMTM3-201ENST00000361909 ERCC1P07992 297 aaPredicted RBP17.02■□□□□ 0.32
CMTM3-201ENST00000361909 FBXO45P0C2W1 286 aa17.02■□□□□ 0.32
CMTM3-201ENST00000361909 SULT1A2P50226 295 aa17.02■□□□□ 0.32
CMTM3-201ENST00000361909 GXYLT1Q4G148 440 aa17.02■□□□□ 0.32
CMTM3-201ENST00000361909 GLYATL3Q5SZD4 288 aa17.02■□□□□ 0.32
CMTM3-201ENST00000361909 BTNL8Q6UX41 500 aa17.02■□□□□ 0.32
CMTM3-201ENST00000361909 RHOUQ7L0Q8 258 aa17.02■□□□□ 0.32
CMTM3-201ENST00000361909 PLPP7Q8NBV4 271 aa17.02■□□□□ 0.32
CMTM3-201ENST00000361909 MRGPRFQ96AM1 343 aa17.02■□□□□ 0.32
CMTM3-201ENST00000361909 CLCC1Q96S66 551 aa17.02■□□□□ 0.32
CMTM3-201ENST00000361909 TECTAO75443 2155 aa17.02■□□□□ 0.32
CMTM3-201ENST00000361909 SCN3AQ9NY46 2000 aa17.02■□□□□ 0.32
CMTM3-201ENST00000361909 H0YGG7 62 aa17.02■□□□□ 0.31
CMTM3-201ENST00000361909 AP4M1O00189 453 aa17.02■□□□□ 0.31
CMTM3-201ENST00000361909 PVRP15151 417 aa17.02■□□□□ 0.31
CMTM3-201ENST00000361909 GSK3AP49840 483 aa17.02■□□□□ 0.31
CMTM3-201ENST00000361909 RAB5CP51148 216 aa17.02■□□□□ 0.31
CMTM3-201ENST00000361909 ARF3P61204 181 aaPredicted RBP17.02■□□□□ 0.31
CMTM3-201ENST00000361909 PSG6Q00889 435 aa17.02■□□□□ 0.31
CMTM3-201ENST00000361909 ELAVL1Q15717 326 aaKnown RBP17.02■□□□□ 0.31
CMTM3-201ENST00000361909 ASPHD2Q6ICH7 369 aa17.02■□□□□ 0.31
CMTM3-201ENST00000361909 ZNF679Q8IYX0 411 aa17.02■□□□□ 0.31
CMTM3-201ENST00000361909 CASTOR1Q8WTX7 329 aa17.02■□□□□ 0.31
CMTM3-201ENST00000361909 EDARADDQ8WWZ3 215 aa17.02■□□□□ 0.31
CMTM3-201ENST00000361909 OIT3Q8WWZ8 545 aa17.02■□□□□ 0.31
CMTM3-201ENST00000361909 RRNAD1Q96FB5 475 aaKnown RBP17.02■□□□□ 0.31
CMTM3-201ENST00000361909 CPNE2Q96FN4 548 aaPredicted RBP17.02■□□□□ 0.31
CMTM3-201ENST00000361909 KIRREL1Q96J84 757 aa17.02■□□□□ 0.31
CMTM3-201ENST00000361909 NECAB3Q96P71 396 aaPredicted RBP17.02■□□□□ 0.31
CMTM3-201ENST00000361909 OPA3Q9H6K4 179 aa17.02■□□□□ 0.31
CMTM3-201ENST00000361909 SRA1Q9HD15 236 aaKnown RBP17.02■□□□□ 0.31
CMTM3-201ENST00000361909 MRPS33Q9Y291 106 aaKnown RBP17.02■□□□□ 0.31
CMTM3-201ENST00000361909 IGKV1D-42A0A075B6H8 117 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 CT62P0C5K7 136 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 LIPCP11150 499 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 PPP1CAP62136 330 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 ROM1Q03395 351 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 TRAPPC6BQ86SZ2 158 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 FJX1Q86VR8 437 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 SLC25A45Q8N413 288 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 C19orf47Q8N9M1 422 aaKnown RBP17.01■□□□□ 0.31
CMTM3-201ENST00000361909 OR52R1Q8NGF1 315 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 RAB22AQ9UL26 194 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 TMEM131Q92545 1883 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 TMEM235A6NFC5 223 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 CSTAP01040 98 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 CBR1P16152 277 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 ADH6P28332 368 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 HGFACQ04756 655 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 RBM39Q14498 530 aaKnown RBP17.01■□□□□ 0.31
CMTM3-201ENST00000361909 KCNAB1Q14722 419 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 SGCAQ16586 387 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 ZNF260Q3ZCT1 412 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 TMEM128Q5BJH2 165 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 MESTQ5EB52 335 aa17.01■□□□□ 0.31
CMTM3-201ENST00000361909 CD163Q86VB7 1156 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms