RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CLEC18CQ8NCF0 446 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 OR4S1Q8NGB4 309 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 PPP1R1CQ8WVI7 109 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 SLC17A4Q9Y2C5 497 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 VAMP5O95183 116 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 SMAD2Q15796 467 aaKnown RBP8.49□□□□□ -1.05
VPS13A-203ENST00000360280 PRSS3P2Q8NHM4 247 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 SMIM19Q96E16 107 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 CRXO43186 299 aaPredicted RBP8.49□□□□□ -1.05
VPS13A-203ENST00000360280 ARR3P36575 388 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 SYT14P1Q58G82 188 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 TMEM255BQ8WV15 326 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 C7orf72A4D263 438 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 FURINP09958 794 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 APOBEC1P41238 236 aaKnown RBP8.49□□□□□ -1.05
VPS13A-203ENST00000360280 HLXQ14774 488 aaPredicted RBP8.49□□□□□ -1.05
VPS13A-203ENST00000360280 HNRNPA1L2Q32P51 320 aaKnown RBP8.49□□□□□ -1.05
VPS13A-203ENST00000360280 NHSL2Q5HYW2 709 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 GABRG1Q8N1C3 465 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 CHST14Q8NCH0 376 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 PIGTQ969N2 578 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 LRIT1Q9P2V4 623 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 GPR37O15354 613 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 LRP3O75074 770 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 FAM87AP0C7U9 286 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 RGS13O14921 159 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 MTURNQ8N3F0 131 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 OR5A2Q8NGI9 324 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 EDAQ92838 391 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 CDCP1Q9H5V8 836 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 MMP11P24347 488 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 CSF2RBP32927 897 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 MLF2Q15773 248 aaPredicted RBP8.49□□□□□ -1.05
VPS13A-203ENST00000360280 TMEM128Q5BJH2 165 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 OR10D4PQ8NGN7 298 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 HES4Q9HCC6 221 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 BMP5P22003 454 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 CSF3RQ99062 836 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 SLC35B3Q9H1N7 401 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 PRDX1Q06830 199 aaKnown RBP8.49□□□□□ -1.05
VPS13A-203ENST00000360280 SEC11CQ9BY50 192 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 CD99P14209 185 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 OR1L3Q8NH93 324 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 GALMQ96C23 342 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 C3orf30Q96M34 536 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 ZNF583Q96ND8 569 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 LOC107986453A0A1B0GWG9 222 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 IVDP26440 423 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 HTR1DP28221 377 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 H1FNTQ75WM6 255 aaPredicted RBP8.49□□□□□ -1.05
VPS13A-203ENST00000360280 SLC39A11Q8N1S5 342 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 CDCA4Q9BXL8 241 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 IL17CQ9P0M4 197 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 CGGBP1Q9UFW8 167 aaPredicted RBP8.49□□□□□ -1.05
VPS13A-203ENST00000360280 SIX1Q15475 284 aaPredicted RBP8.49□□□□□ -1.05
VPS13A-203ENST00000360280 PRSS42Q7Z5A4 293 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 TP53RKQ96S44 253 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 TOGARAM1Q9Y4F4 1720 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 HOXC11O43248 304 aaPredicted RBP8.48□□□□□ -1.05
VPS13A-203ENST00000360280 NEURL1O76050 574 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 NPY1RP25929 384 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 RAD52P43351 418 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 YPEL5P62699 121 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 SEMA3BQ13214 749 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 C11orf40Q8WZ69 217 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 POM121L2Q96KW2 1035 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 ATP6V1FQ16864 119 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 MANBALQ9NQG1 85 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 M0R2Z0 102 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 XRCC2O43543 280 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 TEAD1P28347 426 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 LIPAP38571 399 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 CD81P60033 236 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 NPY5RQ15761 445 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 TAZQ16635 292 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 SLCO4A1Q96BD0 722 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 ANAPC16Q96DE5 110 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 FER1L6-AS2Q96M78 137 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 SLAMF8Q9P0V8 285 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 TBXA2RP21731 343 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 B2MP61769 119 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 FAM3AP98173 230 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 PHYHIPLQ96FC7 376 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 PECRQ9BY49 303 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 TAS2R4Q9NYW5 299 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 TMEM238LA0A1B0GVL6 79 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 A6NJY4 79 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 FUCA1P04066 466 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 GPR85P60893 370 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 WDR74Q6RFH5 385 aaPredicted RBP8.48□□□□□ -1.05
VPS13A-203ENST00000360280 VASH2Q86V25 355 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 EXD3Q8N9H8 876 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 SLC26A10Q8NG04 563 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 ZPBPQ9BS86 351 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 PRRC2BQ5JSZ5 2229 aaKnown RBP8.48□□□□□ -1.05
VPS13A-203ENST00000360280 ABCD3P28288 659 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 G6PCP35575 357 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 BANF2Q9H503 90 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 TTRP02766 147 aa8.48□□□□□ -1.05
VPS13A-203ENST00000360280 WDTC1Q8N5D0 677 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms