RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 MRPS18CQ9Y3D5 142 aaKnown RBP13.17□□□□□ -0.3
GABPB1-202ENST00000359031 RHBDD3Q9Y3P4 386 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 MRPS18BQ9Y676 258 aaKnown RBP13.17□□□□□ -0.3
GABPB1-202ENST00000359031 CACNA1CQ13936 2221 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 A0A1B0GUH1 482 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 LRRC3CA6NJW4 275 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 KDM4BO94953 1096 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 TGM6O95932 706 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 ALDOBP05062 364 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 ANXA3P12429 323 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 CCL1P22362 96 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 CTSSP25774 331 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 PRSS3P35030 304 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 CX3CR1P49238 355 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 ZNF121P58317 390 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-202ENST00000359031 RAC3P60763 192 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 TNK1Q13470 666 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 SF3B4Q15427 424 aaKnown RBP eCLIP13.17□□□□□ -0.3
GABPB1-202ENST00000359031 PCGF3Q3KNV8 242 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 TMEM164Q5U3C3 297 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 SFRP4Q6FHJ7 346 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-202ENST00000359031 JMJD6Q6NYC1 403 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-202ENST00000359031 ZNF813Q6ZN06 617 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 OR1M1Q8NGA1 313 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 OR1J2Q8NGS2 313 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 OR14L1PQ8NHC6 308 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 UCN2Q96RP3 112 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 SLA2Q9H6Q3 261 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 METTL17Q9H7H0 456 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-202ENST00000359031 SCPEP1Q9HB40 452 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 TMEM138Q9NPI0 162 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 PTTG3PQ9NZH4 202 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 WASF3Q9UPY6 502 aa13.17□□□□□ -0.3
GABPB1-202ENST00000359031 SDK2Q58EX2 2172 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 IGHV3-15A0A0B4J1V0 119 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 A0A1B0GTI1 187 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 CDX4O14627 284 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-202ENST00000359031 RER1O15258 196 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 NDUFB6O95139 128 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 ZNF20P17024 532 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 RAB3AP20336 220 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 GNALP38405 381 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 CYB561P49447 251 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 MECP2P51608 486 aaKnown RBP13.16□□□□□ -0.3
GABPB1-202ENST00000359031 ACTBP60709 375 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 ACTG1P63261 375 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 METTL11BQ5VVY1 283 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 UTS2BQ765I0 119 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 SLC22A24Q8N4F4 322 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 ASCC1Q8N9N2 400 aaKnown RBP13.16□□□□□ -0.3
GABPB1-202ENST00000359031 OR11H7Q8NGC8 314 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 OR8B12Q8NGG6 310 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 OR5D14Q8NGL3 314 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 ADAT3Q96EY9 351 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-202ENST00000359031 HYLS1Q96M11 299 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 ZNF385AQ96PM9 386 aaKnown RBP13.16□□□□□ -0.3
GABPB1-202ENST00000359031 CDC6Q99741 560 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 ZNF416Q9BWM5 594 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 SRXN1Q9BYN0 137 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 FOXJ2Q9P0K8 574 aa13.16□□□□□ -0.3
GABPB1-202ENST00000359031 FOXD3Q9UJU5 478 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-202ENST00000359031 SMAD9O15198 467 aaKnown RBP13.15□□□□□ -0.3
GABPB1-202ENST00000359031 DHHO43323 396 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 BPNT1O95861 308 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 WDPCPO95876 746 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 MT-CO3P00414 261 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 SULT1A3P0DMM9 295 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 SULT1A4P0DMN0 295 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 ENPP1P22413 925 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 ZNF84P51523 738 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 PRKXP51817 358 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 SGCAQ16586 387 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 SLC25A25Q6KCM7 469 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 DOK3Q7L591 496 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 GGNQ86UU5 652 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 C20orf196Q8IYI0 205 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 GJC3Q8NFK1 279 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 OR51E1Q8TCB6 317 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 GPX8Q8TED1 209 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 ITFG2Q969R8 447 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 NABP1Q96AH0 204 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 DACT3Q96B18 629 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-202ENST00000359031 NKIRAS2Q9NYR9 191 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 RAB22AQ9UL26 194 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 NCKAP5O14513 1909 aa13.15□□□□□ -0.3
GABPB1-202ENST00000359031 TERTO14746 1132 aaKnown RBP13.14□□□□□ -0.31
GABPB1-202ENST00000359031 ARPC1BO15143 372 aaKnown RBP13.14□□□□□ -0.31
GABPB1-202ENST00000359031 SCGNO76038 276 aa13.14□□□□□ -0.31
GABPB1-202ENST00000359031 LPLP06858 475 aa13.14□□□□□ -0.31
GABPB1-202ENST00000359031 AKAIN1P0CW23 69 aa13.14□□□□□ -0.31
GABPB1-202ENST00000359031 DLSTP36957 453 aa13.14□□□□□ -0.31
GABPB1-202ENST00000359031 VEGFCP49767 419 aa13.14□□□□□ -0.31
GABPB1-202ENST00000359031 HIST1H3AP68431 136 aa13.14□□□□□ -0.31
GABPB1-202ENST00000359031 ENDOGQ14249 297 aaKnown RBP13.14□□□□□ -0.31
GABPB1-202ENST00000359031 LINC00303Q3SY05 128 aa13.14□□□□□ -0.31
GABPB1-202ENST00000359031 PHYHD1Q5SRE7 291 aa13.14□□□□□ -0.31
GABPB1-202ENST00000359031 HIST2H3PS2Q5TEC6 136 aa13.14□□□□□ -0.31
GABPB1-202ENST00000359031 RAB12Q6IQ22 244 aa13.14□□□□□ -0.31
GABPB1-202ENST00000359031 HIST2H3AQ71DI3 136 aa13.14□□□□□ -0.31
GABPB1-202ENST00000359031 PGAP1Q75T13 922 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms